Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.39■■■□□ 2.62
ARXQ96QS3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARXQ96QS3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
ARXQ96QS3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
ARXQ96QS3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
ARXQ96QS3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARXQ96QS3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
ARXQ96QS3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ARXQ96QS3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ARXQ96QS3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.36■■■□□ 2.61
ARXQ96QS3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.36■■■□□ 2.61
ARXQ96QS3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
ARXQ96QS3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARXQ96QS3 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARXQ96QS3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
ARXQ96QS3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.35■■■□□ 2.61
ARXQ96QS3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.35■■■□□ 2.61
ARXQ96QS3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.35■■■□□ 2.61
ARXQ96QS3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARXQ96QS3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.34■■■□□ 2.61
ARXQ96QS3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARXQ96QS3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARXQ96QS3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARXQ96QS3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARXQ96QS3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
ARXQ96QS3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC31.33■■■□□ 2.61
ARXQ96QS3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC31.33■■■□□ 2.61
ARXQ96QS3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.33■■■□□ 2.61
ARXQ96QS3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.33■■■□□ 2.61
ARXQ96QS3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARXQ96QS3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
ARXQ96QS3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARXQ96QS3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
ARXQ96QS3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
ARXQ96QS3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.32■■■□□ 2.6
ARXQ96QS3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ARXQ96QS3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.3■■■□□ 2.6
ARXQ96QS3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ARXQ96QS3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC31.3■■■□□ 2.6
ARXQ96QS3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARXQ96QS3 BX664725.1-201ENST00000438252 379 ntBASIC31.3■■■□□ 2.6
ARXQ96QS3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
ARXQ96QS3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
ARXQ96QS3 AC005837.3-201ENST00000612163 286 ntBASIC31.29■■■□□ 2.6
ARXQ96QS3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ARXQ96QS3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARXQ96QS3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARXQ96QS3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.27■■■□□ 2.6
ARXQ96QS3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARXQ96QS3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARXQ96QS3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.27■■■□□ 2.6
ARXQ96QS3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARXQ96QS3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARXQ96QS3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.6
ARXQ96QS3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC31.26■■■□□ 2.59
ARXQ96QS3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC31.26■■■□□ 2.59
ARXQ96QS3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC31.26■■■□□ 2.59
ARXQ96QS3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC31.26■■■□□ 2.59
ARXQ96QS3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.26■■■□□ 2.59
ARXQ96QS3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
ARXQ96QS3 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ARXQ96QS3 AC131281.2-201ENST00000520478 145 ntBASIC31.25■■■□□ 2.59
ARXQ96QS3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARXQ96QS3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.25■■■□□ 2.59
ARXQ96QS3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
ARXQ96QS3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.24■■■□□ 2.59
ARXQ96QS3 AC087393.1-201ENST00000582896 145 ntBASIC31.23■■■□□ 2.59
ARXQ96QS3 AC110285.6-201ENST00000617652 491 ntBASIC31.23■■■□□ 2.59
ARXQ96QS3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.23■■■□□ 2.59
ARXQ96QS3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
ARXQ96QS3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ARXQ96QS3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
ARXQ96QS3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.22■■■□□ 2.59
ARXQ96QS3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
ARXQ96QS3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.21■■■□□ 2.59
ARXQ96QS3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
ARXQ96QS3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.21■■■□□ 2.59
ARXQ96QS3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC31.21■■■□□ 2.59
ARXQ96QS3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
ARXQ96QS3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
ARXQ96QS3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ARXQ96QS3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ARXQ96QS3 AL136116.3-201ENST00000402907 1138 ntBASIC31.2■■■□□ 2.59
ARXQ96QS3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
ARXQ96QS3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC31.2■■■□□ 2.59
ARXQ96QS3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
ARXQ96QS3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
ARXQ96QS3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
ARXQ96QS3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
ARXQ96QS3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
ARXQ96QS3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARXQ96QS3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
ARXQ96QS3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
ARXQ96QS3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
ARXQ96QS3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.18■■■□□ 2.58
ARXQ96QS3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
ARXQ96QS3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.18■■■□□ 2.58
ARXQ96QS3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.18■■■□□ 2.58
ARXQ96QS3 RARRES2P6-201ENST00000567333 442 ntBASIC31.18■■■□□ 2.58
ARXQ96QS3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms