Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 VPS61YDR136C 573 nt6.23□□□□□ -1.41
TDP1P38319 RAI1YGL246C 1164 nt6.23□□□□□ -1.41
TDP1P38319 UBC12YLR306W 567 nt6.23□□□□□ -1.41
TDP1P38319 ASR1YPR093C 867 nt6.23□□□□□ -1.41
TDP1P38319 BIO3YNR058W 1443 nt6.23□□□□□ -1.41
TDP1P38319 ARO10YDR380W 1908 nt6.23□□□□□ -1.41
TDP1P38319 CSC1YLR241W 2349 nt6.22□□□□□ -1.41
TDP1P38319 SVF1YDR346C 1446 nt6.22□□□□□ -1.41
TDP1P38319 MPA43YNL249C 1629 nt6.21□□□□□ -1.41
TDP1P38319 ALT2YDR111C 1524 nt6.21□□□□□ -1.42
TDP1P38319 PPH21YDL134C 1110 nt6.21□□□□□ -1.42
TDP1P38319 QCR8YJL166W 285 nt6.21□□□□□ -1.42
TDP1P38319 MDE1YJR024C 735 nt6.21□□□□□ -1.42
TDP1P38319 ARC19YKL013C 516 nt6.21□□□□□ -1.42
TDP1P38319 TAF11YML015C 1041 nt6.21□□□□□ -1.42
TDP1P38319 TIF34YMR146C 1044 nt6.21□□□□□ -1.42
TDP1P38319 KTR5YNL029C 1569 nt6.21□□□□□ -1.42
TDP1P38319 COX15YER141W 1461 nt6.21□□□□□ -1.42
TDP1P38319 NTE1YML059C 5040 nt6.21□□□□□ -1.42
TDP1P38319 YGR054WYGR054W 1929 nt6.21□□□□□ -1.42
TDP1P38319 YHK8YHR048W 1545 nt6.2□□□□□ -1.42
TDP1P38319 YRB2YIL063C 984 nt6.2□□□□□ -1.42
TDP1P38319 LDB7YBL006C 543 nt6.2□□□□□ -1.42
TDP1P38319 RNH1YMR234W 1047 nt6.2□□□□□ -1.42
TDP1P38319 LDB16YCL005W 771 nt6.2□□□□□ -1.42
TDP1P38319 YDL085C-AYDL085C-A 207 nt6.19□□□□□ -1.42
TDP1P38319 GPI11YDR302W 660 nt6.19□□□□□ -1.42
TDP1P38319 COA1YIL157C 594 nt6.19□□□□□ -1.42
TDP1P38319 YKL102CYKL102C 306 nt6.19□□□□□ -1.42
TDP1P38319 MRPL24YMR193W 777 nt6.19□□□□□ -1.42
TDP1P38319 BSC4YNL269W 396 nt6.19□□□□□ -1.42
TDP1P38319 GYP8YFL027C 1494 nt6.19□□□□□ -1.42
TDP1P38319 YFR006WYFR006W 1608 nt6.18□□□□□ -1.42
TDP1P38319 PET112YBL080C 1626 nt6.18□□□□□ -1.42
TDP1P38319 MRPL1YDR116C 858 nt6.18□□□□□ -1.42
TDP1P38319 YDR278CYDR278C 318 nt6.18□□□□□ -1.42
TDP1P38319 COX3Q0275 810 nt6.18□□□□□ -1.42
TDP1P38319 LYS1YIR034C 1122 nt6.18□□□□□ -1.42
TDP1P38319 CCP1YKR066C 1086 nt6.18□□□□□ -1.42
TDP1P38319 YML6YML025C 861 nt6.18□□□□□ -1.42
TDP1P38319 IES2YNL215W 963 nt6.18□□□□□ -1.42
TDP1P38319 snR34snR34 203 nt6.18□□□□□ -1.42
TDP1P38319 KTR3YBR205W 1215 nt6.18□□□□□ -1.42
TDP1P38319 ARE2YNR019W 1929 nt6.18□□□□□ -1.42
TDP1P38319 JIP4YDR475C 2631 nt6.18□□□□□ -1.42
TDP1P38319 YIL092WYIL092W 1902 nt6.17□□□□□ -1.42
TDP1P38319 RGD1YBR260C 2001 nt6.17□□□□□ -1.42
TDP1P38319 MKK1YOR231W 1527 nt6.17□□□□□ -1.42
TDP1P38319 CDC11YJR076C 1248 nt6.17□□□□□ -1.42
TDP1P38319 CYS4YGR155W 1524 nt6.16□□□□□ -1.42
TDP1P38319 CRH1YGR189C 1524 nt6.16□□□□□ -1.42
TDP1P38319 PPM1YDR435C 987 nt6.16□□□□□ -1.42
TDP1P38319 KTR1YOR099W 1182 nt6.16□□□□□ -1.42
TDP1P38319 CTF19YPL018W 1110 nt6.16□□□□□ -1.42
TDP1P38319 AME1YBR211C 975 nt6.16□□□□□ -1.42
TDP1P38319 DEF1YKL054C 2217 nt6.15□□□□□ -1.42
TDP1P38319 YDL157CYDL157C 357 nt6.15□□□□□ -1.42
TDP1P38319 YHR213W-BYHR213W-B 300 nt6.15□□□□□ -1.42
TDP1P38319 LCB3YJL134W 1230 nt6.15□□□□□ -1.42
TDP1P38319 YAR064WYAR064W 300 nt6.15□□□□□ -1.42
TDP1P38319 ECM31YBR176W 939 nt6.15□□□□□ -1.42
TDP1P38319 YMR027WYMR027W 1413 nt6.15□□□□□ -1.43
TDP1P38319 RSA4YCR072C 1548 nt6.15□□□□□ -1.43
TDP1P38319 FMP40YPL222W 2067 nt6.14□□□□□ -1.43
TDP1P38319 FET4YMR319C 1659 nt6.14□□□□□ -1.43
TDP1P38319 PRP40YKL012W 1752 nt6.14□□□□□ -1.43
TDP1P38319 MEH1YKR007W 555 nt6.14□□□□□ -1.43
TDP1P38319 DIA1YMR316W 1011 nt6.14□□□□□ -1.43
TDP1P38319 RUF23RUF23 254 nt6.14□□□□□ -1.43
TDP1P38319 PEX34YCL056C 435 nt6.14□□□□□ -1.43
TDP1P38319 YML133CYML133C 4125 nt6.14□□□□□ -1.43
TDP1P38319 HXT15YDL245C 1704 nt6.13□□□□□ -1.43
TDP1P38319 HXT16YJR158W 1704 nt6.13□□□□□ -1.43
TDP1P38319 PYC2YBR218C 3543 nt6.13□□□□□ -1.43
TDP1P38319 VMA3YEL027W 483 nt6.13□□□□□ -1.43
TDP1P38319 MPS2YGL075C 1164 nt6.13□□□□□ -1.43
TDP1P38319 VAR1Q0140 1197 nt6.13□□□□□ -1.43
TDP1P38319 YIR020W-AYIR020W-A 243 nt6.13□□□□□ -1.43
TDP1P38319 YLR283WYLR283W 945 nt6.13□□□□□ -1.43
TDP1P38319 VPS28YPL065W 729 nt6.13□□□□□ -1.43
TDP1P38319 CCT8YJL008C 1707 nt6.13□□□□□ -1.43
TDP1P38319 GUF1YLR289W 1938 nt6.13□□□□□ -1.43
TDP1P38319 YOL036WYOL036W 2286 nt6.13□□□□□ -1.43
TDP1P38319 YDL023CYDL023C 321 nt6.12□□□□□ -1.43
TDP1P38319 COX9YDL067C 180 nt6.12□□□□□ -1.43
TDP1P38319 PMP3YDR276C 168 nt6.12□□□□□ -1.43
TDP1P38319 YDR514CYDR514C 1452 nt6.12□□□□□ -1.43
TDP1P38319 TMT1YER175C 900 nt6.12□□□□□ -1.43
TDP1P38319 YIR042CYIR042C 711 nt6.12□□□□□ -1.43
TDP1P38319 YJR056CYJR056C 711 nt6.12□□□□□ -1.43
TDP1P38319 SRL2YLR082C 1179 nt6.12□□□□□ -1.43
TDP1P38319 ICT1YLR099C 1185 nt6.12□□□□□ -1.43
TDP1P38319 RSC2YLR357W 2670 nt6.12□□□□□ -1.43
TDP1P38319 MSN2YMR037C 2115 nt6.12□□□□□ -1.43
TDP1P38319 PRP24YMR268C 1335 nt6.12□□□□□ -1.43
TDP1P38319 YNR048WYNR048W 1182 nt6.12□□□□□ -1.43
TDP1P38319 LSC1YOR142W 990 nt6.12□□□□□ -1.43
TDP1P38319 LDB19YOR322C 2457 nt6.12□□□□□ -1.43
TDP1P38319 RMD9YGL107C 1941 nt6.11□□□□□ -1.43
TDP1P38319 PDR18YNR070W 4002 nt6.11□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 98.5 ms