Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 RQC1YDR333C 2172 nt9.5□□□□□ -0.89
UFD4P33202 YPR114WYPR114W 948 nt9.5□□□□□ -0.89
UFD4P33202 SLA2YNL243W 2907 nt9.5□□□□□ -0.89
UFD4P33202 OPI8YKR035C 642 nt9.49□□□□□ -0.89
UFD4P33202 YNR042WYNR042W 429 nt9.49□□□□□ -0.89
UFD4P33202 RKI1YOR095C 777 nt9.49□□□□□ -0.89
UFD4P33202 MRPL36YBR122C 534 nt9.49□□□□□ -0.89
UFD4P33202 RRP4YHR069C 1080 nt9.47□□□□□ -0.89
UFD4P33202 CTF3YLR381W 2202 nt9.47□□□□□ -0.89
UFD4P33202 GAA1YLR088W 1845 nt9.47□□□□□ -0.89
UFD4P33202 GTB1YDR221W 2109 nt9.47□□□□□ -0.89
UFD4P33202 UTR2YEL040W 1404 nt9.46□□□□□ -0.9
UFD4P33202 YDL114WYDL114W 927 nt9.46□□□□□ -0.9
UFD4P33202 YLR123CYLR123C 330 nt9.46□□□□□ -0.9
UFD4P33202 IES2YNL215W 963 nt9.46□□□□□ -0.9
UFD4P33202 KTR1YOR099W 1182 nt9.46□□□□□ -0.9
UFD4P33202 FRT1YOR324C 1809 nt9.45□□□□□ -0.9
UFD4P33202 PRM10YJL108C 1152 nt9.44□□□□□ -0.9
UFD4P33202 RRN10YBL025W 438 nt9.44□□□□□ -0.9
UFD4P33202 THI2YBR240C 1353 nt9.43□□□□□ -0.9
UFD4P33202 PAN6YIL145C 930 nt9.43□□□□□ -0.9
UFD4P33202 DPH5YLR172C 903 nt9.42□□□□□ -0.9
UFD4P33202 YPL062WYPL062W 405 nt9.41□□□□□ -0.9
UFD4P33202 SMK1YPR054W 1167 nt9.41□□□□□ -0.9
UFD4P33202 YOR389WYOR389W 1875 nt9.41□□□□□ -0.9
UFD4P33202 WHI2YOR043W 1461 nt9.41□□□□□ -0.9
UFD4P33202 ECM27YJR106W 2178 nt9.4□□□□□ -0.9
UFD4P33202 YMC1YPR058W 924 nt9.4□□□□□ -0.9
UFD4P33202 YLR173WYLR173W 1827 nt9.4□□□□□ -0.91
UFD4P33202 YCR075W-AYCR075W-A 228 nt9.4□□□□□ -0.91
UFD4P33202 YKR032WYKR032W 315 nt9.39□□□□□ -0.91
UFD4P33202 YBR230W-AYBR230W-A 201 nt9.39□□□□□ -0.91
UFD4P33202 YGL194C-AYGL194C-A 243 nt9.38□□□□□ -0.91
UFD4P33202 SOG2YOR353C 2376 nt9.37□□□□□ -0.91
UFD4P33202 GTT3YEL017W 1014 nt9.37□□□□□ -0.91
UFD4P33202 ECM38YLR299W 1983 nt9.37□□□□□ -0.91
UFD4P33202 HDA1YNL021W 2121 nt9.37□□□□□ -0.91
UFD4P33202 NUD1YOR373W 2556 nt9.36□□□□□ -0.91
UFD4P33202 ATG4YNL223W 1485 nt9.36□□□□□ -0.91
UFD4P33202 tR(ACG)DtR(ACG)D 73 nt9.35□□□□□ -0.91
UFD4P33202 tR(ACG)EtR(ACG)E 73 nt9.35□□□□□ -0.91
UFD4P33202 tR(ACG)KtR(ACG)K 73 nt9.35□□□□□ -0.91
UFD4P33202 tR(ACG)LtR(ACG)L 73 nt9.35□□□□□ -0.91
UFD4P33202 tR(ACG)OtR(ACG)O 73 nt9.35□□□□□ -0.91
UFD4P33202 VID30YGL227W 2877 nt9.35□□□□□ -0.91
UFD4P33202 YEL053W-AYEL053W-A 348 nt9.34□□□□□ -0.91
UFD4P33202 QCR8YJL166W 285 nt9.34□□□□□ -0.91
UFD4P33202 YMR119W-AYMR119W-A 375 nt9.34□□□□□ -0.91
UFD4P33202 RPS9AYPL081W 594 nt9.34□□□□□ -0.91
UFD4P33202 YBR144CYBR144C 315 nt9.34□□□□□ -0.91
UFD4P33202 BDF2YDL070W 1917 nt9.34□□□□□ -0.91
UFD4P33202 PRO3YER023W 861 nt9.34□□□□□ -0.91
UFD4P33202 YHC3YJL059W 1227 nt9.34□□□□□ -0.91
UFD4P33202 YMR010WYMR010W 1218 nt9.33□□□□□ -0.92
UFD4P33202 ORC5YNL261W 1440 nt9.32□□□□□ -0.92
UFD4P33202 HSP12YFL014W 330 nt9.32□□□□□ -0.92
UFD4P33202 YGR182CYGR182C 354 nt9.32□□□□□ -0.92
UFD4P33202 YIR042CYIR042C 711 nt9.32□□□□□ -0.92
UFD4P33202 YNL040WYNL040W 1371 nt9.31□□□□□ -0.92
UFD4P33202 GUD1YDL238C 1470 nt9.31□□□□□ -0.92
UFD4P33202 RPL21AYBR191W 483 nt9.31□□□□□ -0.92
UFD4P33202 RFC1YOR217W 2586 nt9.31□□□□□ -0.92
UFD4P33202 SHM1YBR263W 1473 nt9.3□□□□□ -0.92
UFD4P33202 GIR2YDR152W 798 nt9.3□□□□□ -0.92
UFD4P33202 ICT1YLR099C 1185 nt9.3□□□□□ -0.92
UFD4P33202 PKC1YBL105C 3456 nt9.3□□□□□ -0.92
UFD4P33202 GID7YCL039W 2238 nt9.29□□□□□ -0.92
UFD4P33202 YAP1801YHR161C 1914 nt9.29□□□□□ -0.92
UFD4P33202 RTG2YGL252C 1767 nt9.29□□□□□ -0.92
UFD4P33202 APE3YBR286W 1614 nt9.28□□□□□ -0.92
UFD4P33202 YDR154CYDR154C 351 nt9.28□□□□□ -0.92
UFD4P33202 YHR070C-AYHR070C-A 411 nt9.28□□□□□ -0.92
UFD4P33202 PGU1YJR153W 1086 nt9.28□□□□□ -0.92
UFD4P33202 ATP14YLR295C 375 nt9.28□□□□□ -0.92
UFD4P33202 MCM3YEL032W 2916 nt9.28□□□□□ -0.92
UFD4P33202 YHM2YMR241W 945 nt9.28□□□□□ -0.92
UFD4P33202 SES1YDR023W 1389 nt9.27□□□□□ -0.92
UFD4P33202 TIM54YJL054W 1437 nt9.27□□□□□ -0.92
UFD4P33202 AMD1YML035C 2433 nt9.27□□□□□ -0.93
UFD4P33202 QNS1YHR074W 2145 nt9.27□□□□□ -0.93
UFD4P33202 TRR1YDR353W 960 nt9.27□□□□□ -0.93
UFD4P33202 YKL151CYKL151C 1014 nt9.27□□□□□ -0.93
UFD4P33202 PMT3YOR321W 2262 nt9.26□□□□□ -0.93
UFD4P33202 NOB1YOR056C 1380 nt9.26□□□□□ -0.93
UFD4P33202 MTC1YJL123C 1437 nt9.25□□□□□ -0.93
UFD4P33202 SUF5tG(CCC)O 72 nt9.25□□□□□ -0.93
UFD4P33202 RPT6YGL048C 1218 nt9.25□□□□□ -0.93
UFD4P33202 YGL235WYGL235W 537 nt9.25□□□□□ -0.93
UFD4P33202 VPS61YDR136C 573 nt9.24□□□□□ -0.93
UFD4P33202 YGR176WYGR176W 348 nt9.24□□□□□ -0.93
UFD4P33202 CTF8YHR191C 402 nt9.24□□□□□ -0.93
UFD4P33202 ALR1YOL130W 2580 nt9.23□□□□□ -0.93
UFD4P33202 COX9YDL067C 180 nt9.23□□□□□ -0.93
UFD4P33202 DAL82YNL314W 768 nt9.23□□□□□ -0.93
UFD4P33202 YIL108WYIL108W 2091 nt9.23□□□□□ -0.93
UFD4P33202 XBP1YIL101C 1944 nt9.22□□□□□ -0.93
UFD4P33202 YCL065WYCL065W 369 nt9.22□□□□□ -0.93
UFD4P33202 DJP1YIR004W 1299 nt9.22□□□□□ -0.93
UFD4P33202 COX5AYNL052W 462 nt9.22□□□□□ -0.93
UFD4P33202 HSX1tR(CCU)J 72 nt9.21□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 31.9 ms