Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 CWC21YDR482C 408 nt5.79□□□□□ -1.48
RPL40BP0CH09 RFC4YOL094C 972 nt5.79□□□□□ -1.48
RPL40BP0CH09 YPL062WYPL062W 405 nt5.79□□□□□ -1.48
RPL40BP0CH09 BUD8YLR353W 1812 nt5.78□□□□□ -1.48
RPL40BP0CH09 YGR054WYGR054W 1929 nt5.78□□□□□ -1.48
RPL40BP0CH09 YHR020WYHR020W 2067 nt5.78□□□□□ -1.48
RPL40BP0CH09 YSC83YHR017W 1158 nt5.78□□□□□ -1.48
RPL40BP0CH09 ECM14YHR132C 1293 nt5.78□□□□□ -1.48
RPL40BP0CH09 PRI2YKL045W 1587 nt5.78□□□□□ -1.48
RPL40BP0CH09 CCP1YKR066C 1086 nt5.78□□□□□ -1.48
RPL40BP0CH09 TOS6YNL300W 309 nt5.78□□□□□ -1.48
RPL40BP0CH09 SKI2YLR398C 3864 nt5.78□□□□□ -1.48
RPL40BP0CH09 GAA1YLR088W 1845 nt5.78□□□□□ -1.48
RPL40BP0CH09 RIO1YOR119C 1455 nt5.77□□□□□ -1.49
RPL40BP0CH09 MDH3YDL078C 1032 nt5.77□□□□□ -1.49
RPL40BP0CH09 URH1YDR400W 1023 nt5.77□□□□□ -1.49
RPL40BP0CH09 MRPL13YKR006C 795 nt5.77□□□□□ -1.49
RPL40BP0CH09 DCN1YLR128W 810 nt5.77□□□□□ -1.49
RPL40BP0CH09 MRPS5YBR251W 924 nt5.77□□□□□ -1.49
RPL40BP0CH09 RAP1YNL216W 2484 nt5.76□□□□□ -1.49
RPL40BP0CH09 PRY3YJL078C 2646 nt5.76□□□□□ -1.49
RPL40BP0CH09 CBR1YIL043C 855 nt5.76□□□□□ -1.49
RPL40BP0CH09 AAD15YOL165C 432 nt5.76□□□□□ -1.49
RPL40BP0CH09 PMT3YOR321W 2262 nt5.76□□□□□ -1.49
RPL40BP0CH09 NHA1YLR138W 2958 nt5.75□□□□□ -1.49
RPL40BP0CH09 SPC34YKR037C 888 nt5.75□□□□□ -1.49
RPL40BP0CH09 PEX13YLR191W 1161 nt5.75□□□□□ -1.49
RPL40BP0CH09 RCL1YOL010W 1104 nt5.75□□□□□ -1.49
RPL40BP0CH09 IRC11YOR013W 471 nt5.75□□□□□ -1.49
RPL40BP0CH09 HEM1YDR232W 1647 nt5.74□□□□□ -1.49
RPL40BP0CH09 HXT2YMR011W 1626 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)BtG(GCC)B 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 SUF16tG(GCC)C 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)D1tG(GCC)D1 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)D2tG(GCC)D2 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)EtG(GCC)E 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 SUF20tG(GCC)F1 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)F2tG(GCC)F2 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)G1tG(GCC)G1 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)G2tG(GCC)G2 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)J1tG(GCC)J1 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 SUF23tG(GCC)J2 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)MtG(GCC)M 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)O1tG(GCC)O1 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 SUF17tG(GCC)O2 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)P1tG(GCC)P1 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 tG(GCC)P2tG(GCC)P2 71 nt5.74□□□□□ -1.49
RPL40BP0CH09 ATG36YJL185C 882 nt5.74□□□□□ -1.49
RPL40BP0CH09 CIN4YMR138W 576 nt5.74□□□□□ -1.49
RPL40BP0CH09 YIL055CYIL055C 1884 nt5.74□□□□□ -1.49
RPL40BP0CH09 GEF1YJR040W 2340 nt5.73□□□□□ -1.49
RPL40BP0CH09 YPT1YFL038C 621 nt5.73□□□□□ -1.49
RPL40BP0CH09 CIS3YJL158C 684 nt5.73□□□□□ -1.49
RPL40BP0CH09 YJR146WYJR146W 354 nt5.73□□□□□ -1.49
RPL40BP0CH09 YLR194CYLR194C 765 nt5.73□□□□□ -1.49
RPL40BP0CH09 SGE1YPR198W 1632 nt5.73□□□□□ -1.49
RPL40BP0CH09 IMA5YJL216C 1746 nt5.72□□□□□ -1.49
RPL40BP0CH09 BIM1YER016W 1035 nt5.72□□□□□ -1.49
RPL40BP0CH09 YGR182CYGR182C 354 nt5.72□□□□□ -1.49
RPL40BP0CH09 DID2YKR035W-A 615 nt5.72□□□□□ -1.49
RPL40BP0CH09 YNL042W-BYNL042W-B 258 nt5.72□□□□□ -1.49
RPL40BP0CH09 TPO3YPR156C 1869 nt5.72□□□□□ -1.49
RPL40BP0CH09 ICS3YJL077C 396 nt5.71□□□□□ -1.5
RPL40BP0CH09 DPH5YLR172C 903 nt5.71□□□□□ -1.5
RPL40BP0CH09 RPS3YNL178W 723 nt5.71□□□□□ -1.5
RPL40BP0CH09 UTR2YEL040W 1404 nt5.71□□□□□ -1.5
RPL40BP0CH09 FAA4YMR246W 2085 nt5.7□□□□□ -1.5
RPL40BP0CH09 SOG2YOR353C 2376 nt5.7□□□□□ -1.5
RPL40BP0CH09 PPM1YDR435C 987 nt5.7□□□□□ -1.5
RPL40BP0CH09 ECM31YBR176W 939 nt5.7□□□□□ -1.5
RPL40BP0CH09 CNE1YAL058W 1509 nt5.69□□□□□ -1.5
RPL40BP0CH09 YGL194C-AYGL194C-A 243 nt5.69□□□□□ -1.5
RPL40BP0CH09 MDE1YJR024C 735 nt5.69□□□□□ -1.5
RPL40BP0CH09 OGG1YML060W 1131 nt5.69□□□□□ -1.5
RPL40BP0CH09 OST3YOR085W 1053 nt5.69□□□□□ -1.5
RPL40BP0CH09 MRPL36YBR122C 534 nt5.69□□□□□ -1.5
RPL40BP0CH09 RGT2YDL138W 2292 nt5.69□□□□□ -1.5
RPL40BP0CH09 VID30YGL227W 2877 nt5.69□□□□□ -1.5
RPL40BP0CH09 RIX7YLL034C 2514 nt5.68□□□□□ -1.5
RPL40BP0CH09 YKL031WYKL031W 414 nt5.68□□□□□ -1.5
RPL40BP0CH09 FBA1YKL060C 1080 nt5.68□□□□□ -1.5
RPL40BP0CH09 CRP1YHR146W 1398 nt5.67□□□□□ -1.5
RPL40BP0CH09 COX20YDR231C 618 nt5.67□□□□□ -1.5
RPL40BP0CH09 LEU5YHR002W 1074 nt5.67□□□□□ -1.5
RPL40BP0CH09 ECM15YBL001C 315 nt5.67□□□□□ -1.5
RPL40BP0CH09 DUS4YLR405W 1104 nt5.67□□□□□ -1.5
RPL40BP0CH09 YML6YML025C 861 nt5.67□□□□□ -1.5
RPL40BP0CH09 XBP1YIL101C 1944 nt5.67□□□□□ -1.5
RPL40BP0CH09 PRP2YNR011C 2631 nt5.67□□□□□ -1.5
RPL40BP0CH09 YDR306CYDR306C 1437 nt5.66□□□□□ -1.5
RPL40BP0CH09 NTE1YML059C 5040 nt5.66□□□□□ -1.5
RPL40BP0CH09 SMC5YOL034W 3282 nt5.66□□□□□ -1.5
RPL40BP0CH09 GIR2YDR152W 798 nt5.66□□□□□ -1.5
RPL40BP0CH09 VAM7YGL212W 951 nt5.66□□□□□ -1.5
RPL40BP0CH09 YLR118CYLR118C 684 nt5.66□□□□□ -1.5
RPL40BP0CH09 MRPL4YLR439W 960 nt5.66□□□□□ -1.5
RPL40BP0CH09 LST8YNL006W 912 nt5.66□□□□□ -1.5
RPL40BP0CH09 RPL3YOR063W 1164 nt5.66□□□□□ -1.5
RPL40BP0CH09 MOD5YOR274W 1287 nt5.66□□□□□ -1.5
RPL40BP0CH09 EDE1YBL047C 4146 nt5.66□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 100.5 ms