Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 LINC00543-201ENST00000567234 1845 ntBASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV6-7A0A0A0MS04 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV6-7A0A0A0MS04 AL359258.2-201ENST00000564063 1566 ntBASIC20.08■□□□□ 0.81
TRBV6-7A0A0A0MS04 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TRBV6-7A0A0A0MS04 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TRBV6-7A0A0A0MS04 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV6-7A0A0A0MS04 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV6-7A0A0A0MS04 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV6-7A0A0A0MS04 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
TRBV6-7A0A0A0MS04 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.08■□□□□ 0.8
TRBV6-7A0A0A0MS04 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.08■□□□□ 0.8
TRBV6-7A0A0A0MS04 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC138932.3-201ENST00000567634 1902 ntBASIC20.08■□□□□ 0.8
TRBV6-7A0A0A0MS04 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 HLA-V-202ENST00000446817 847 ntBASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.07■□□□□ 0.8
TRBV6-7A0A0A0MS04 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC096887.2-201ENST00000623443 1957 ntBASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.06■□□□□ 0.8
TRBV6-7A0A0A0MS04 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 AL359504.2-201ENST00000605506 1601 ntBASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC022211.4-201ENST00000625094 2161 ntBASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV6-7A0A0A0MS04 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV6-7A0A0A0MS04 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC068473.5-201ENST00000616428 2072 ntBASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 ZNRF2P2-203ENST00000454624 420 ntBASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRBV6-7A0A0A0MS04 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV6-7A0A0A0MS04 AC079834.2-201ENST00000609776 1949 ntBASIC20.02■□□□□ 0.79
TRBV6-7A0A0A0MS04 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-7A0A0A0MS04 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.01■□□□□ 0.79
TRBV6-7A0A0A0MS04 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-7A0A0A0MS04 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRBV6-7A0A0A0MS04 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
TRBV6-7A0A0A0MS04 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRBV6-7A0A0A0MS04 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms