Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
UBR4Q5T4S7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 AC127502.1-201ENST00000399971 1502 ntBASIC13.74□□□□□ -0.21
UBR4Q5T4S7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
UBR4Q5T4S7 AC024257.2-201ENST00000549699 147 ntBASIC13.74□□□□□ -0.21
UBR4Q5T4S7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
UBR4Q5T4S7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.73□□□□□ -0.21
UBR4Q5T4S7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC13.73□□□□□ -0.21
UBR4Q5T4S7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBR4Q5T4S7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBR4Q5T4S7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC13.73□□□□□ -0.21
UBR4Q5T4S7 MIR939-201ENST00000401314 82 ntBASIC13.73□□□□□ -0.21
UBR4Q5T4S7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBR4Q5T4S7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBR4Q5T4S7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
UBR4Q5T4S7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.71□□□□□ -0.21
UBR4Q5T4S7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.71□□□□□ -0.21
UBR4Q5T4S7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBR4Q5T4S7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC13.71□□□□□ -0.21
UBR4Q5T4S7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBR4Q5T4S7 SLC47A1P1-202ENST00000449666 945 ntBASIC13.7□□□□□ -0.22
UBR4Q5T4S7 AC137630.3-201ENST00000607245 391 ntBASIC13.7□□□□□ -0.22
UBR4Q5T4S7 AL137784.2-201ENST00000607332 1000 ntBASIC13.7□□□□□ -0.22
UBR4Q5T4S7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.7□□□□□ -0.22
UBR4Q5T4S7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.7□□□□□ -0.22
UBR4Q5T4S7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC13.7□□□□□ -0.22
UBR4Q5T4S7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBR4Q5T4S7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBR4Q5T4S7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 AC010997.5-201ENST00000609182 354 ntBASIC13.69□□□□□ -0.22
UBR4Q5T4S7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC13.69□□□□□ -0.22
UBR4Q5T4S7 AC093827.2-201ENST00000512654 315 ntBASIC13.69□□□□□ -0.22
UBR4Q5T4S7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 AC087393.1-201ENST00000582896 145 ntBASIC13.68□□□□□ -0.22
UBR4Q5T4S7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 AC010864.1-201ENST00000609407 1511 ntBASIC13.68□□□□□ -0.22
UBR4Q5T4S7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.68□□□□□ -0.22
UBR4Q5T4S7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBR4Q5T4S7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 MIR3960-201ENST00000583311 91 ntBASIC13.66□□□□□ -0.22
UBR4Q5T4S7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 MIR6724-1-201ENST00000616420 92 ntBASIC13.66□□□□□ -0.22
UBR4Q5T4S7 MIR6724-2-201ENST00000616483 92 ntBASIC13.66□□□□□ -0.22
UBR4Q5T4S7 MIR6724-4-201ENST00000617390 92 ntBASIC13.66□□□□□ -0.22
UBR4Q5T4S7 MIR6724-3-201ENST00000622482 92 ntBASIC13.66□□□□□ -0.22
UBR4Q5T4S7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBR4Q5T4S7 EDA-201ENST00000338901 1233 ntBASIC13.65□□□□□ -0.22
UBR4Q5T4S7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBR4Q5T4S7 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
UBR4Q5T4S7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBR4Q5T4S7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms