Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 ADE13YLR359W 1449 nt9.51□□□□□ -0.89
TY2B-LR1P0C2J3 YDL085C-AYDL085C-A 207 nt9.51□□□□□ -0.89
TY2B-LR1P0C2J3 PRB1YEL060C 1908 nt9.51□□□□□ -0.89
TY2B-LR1P0C2J3 TMT1YER175C 900 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 tR(ACG)JtR(ACG)J 73 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 MDH3YDL078C 1032 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 LCB3YJL134W 1230 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 AIM24YJR080C 1185 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 ERG3YLR056W 1098 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 SPE4YLR146C 903 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 UBC11YOR339C 471 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 PRI2YKL045W 1587 nt9.5□□□□□ -0.89
TY2B-LR1P0C2J3 KNH1YDL049C 807 nt9.49□□□□□ -0.89
TY2B-LR1P0C2J3 MRPL13YKR006C 795 nt9.49□□□□□ -0.89
TY2B-LR1P0C2J3 IES2YNL215W 963 nt9.49□□□□□ -0.89
TY2B-LR1P0C2J3 YJL225CYJL225C 5277 nt9.49□□□□□ -0.89
TY2B-LR1P0C2J3 PSY4YBL046W 1326 nt9.48□□□□□ -0.89
TY2B-LR1P0C2J3 POP5YAL033W 522 nt9.48□□□□□ -0.89
TY2B-LR1P0C2J3 YNL019CYNL019C 855 nt9.48□□□□□ -0.89
TY2B-LR1P0C2J3 YNL033WYNL033W 855 nt9.48□□□□□ -0.89
TY2B-LR1P0C2J3 TOS6YNL300W 309 nt9.48□□□□□ -0.89
TY2B-LR1P0C2J3 CDC34YDR054C 888 nt9.47□□□□□ -0.89
TY2B-LR1P0C2J3 YPR114WYPR114W 948 nt9.47□□□□□ -0.89
TY2B-LR1P0C2J3 ARR3YPR201W 1215 nt9.47□□□□□ -0.89
TY2B-LR1P0C2J3 YLR123CYLR123C 330 nt9.47□□□□□ -0.89
TY2B-LR1P0C2J3 YLL066CYLL066C 3618 nt9.46□□□□□ -0.89
TY2B-LR1P0C2J3 YLL067CYLL067C 3618 nt9.46□□□□□ -0.89
TY2B-LR1P0C2J3 UTR2YEL040W 1404 nt9.46□□□□□ -0.89
TY2B-LR1P0C2J3 YDR415CYDR415C 1125 nt9.46□□□□□ -0.9
TY2B-LR1P0C2J3 CBP4YGR174C 513 nt9.46□□□□□ -0.9
TY2B-LR1P0C2J3 PMA2YPL036W 2844 nt9.46□□□□□ -0.9
TY2B-LR1P0C2J3 TKL2YBR117C 2046 nt9.46□□□□□ -0.9
TY2B-LR1P0C2J3 ARP2YDL029W 1176 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 YDL114WYDL114W 927 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 RAD24YER173W 1980 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 RRP4YHR069C 1080 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 GCN3YKR026C 918 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 MRPL36YBR122C 534 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 VID30YGL227W 2877 nt9.45□□□□□ -0.9
TY2B-LR1P0C2J3 RGT2YDL138W 2292 nt9.44□□□□□ -0.9
TY2B-LR1P0C2J3 MCH1YDL054C 1461 nt9.44□□□□□ -0.9
TY2B-LR1P0C2J3 YEL068CYEL068C 333 nt9.44□□□□□ -0.9
TY2B-LR1P0C2J3 TSA1YML028W 591 nt9.44□□□□□ -0.9
TY2B-LR1P0C2J3 HAP3YBL021C 435 nt9.44□□□□□ -0.9
TY2B-LR1P0C2J3 YER137CYER137C 447 nt9.43□□□□□ -0.9
TY2B-LR1P0C2J3 YKL031WYKL031W 414 nt9.43□□□□□ -0.9
TY2B-LR1P0C2J3 ERI1YPL096C-A 207 nt9.43□□□□□ -0.9
TY2B-LR1P0C2J3 PRC1YMR297W 1599 nt9.43□□□□□ -0.9
TY2B-LR1P0C2J3 YFR034W-AYFR034W-A 288 nt9.42□□□□□ -0.9
TY2B-LR1P0C2J3 YIR042CYIR042C 711 nt9.42□□□□□ -0.9
TY2B-LR1P0C2J3 MDL2YPL270W 2322 nt9.41□□□□□ -0.9
TY2B-LR1P0C2J3 YJR015WYJR015W 1533 nt9.41□□□□□ -0.9
TY2B-LR1P0C2J3 YMR155WYMR155W 1644 nt9.41□□□□□ -0.9
TY2B-LR1P0C2J3 CNE1YAL058W 1509 nt9.4□□□□□ -0.9
TY2B-LR1P0C2J3 YJR107WYJR107W 987 nt9.4□□□□□ -0.9
TY2B-LR1P0C2J3 YAL056C-AYAL056C-A 351 nt9.4□□□□□ -0.9
TY2B-LR1P0C2J3 HSP26YBR072W 645 nt9.4□□□□□ -0.9
TY2B-LR1P0C2J3 MCM3YEL032W 2916 nt9.4□□□□□ -0.9
TY2B-LR1P0C2J3 CHA1YCL064C 1083 nt9.39□□□□□ -0.91
TY2B-LR1P0C2J3 PEX13YLR191W 1161 nt9.37□□□□□ -0.91
TY2B-LR1P0C2J3 SFC1YJR095W 969 nt9.37□□□□□ -0.91
TY2B-LR1P0C2J3 CCP1YKR066C 1086 nt9.37□□□□□ -0.91
TY2B-LR1P0C2J3 ARC35YNR035C 1029 nt9.35□□□□□ -0.91
TY2B-LR1P0C2J3 CAR1YPL111W 1002 nt9.35□□□□□ -0.91
TY2B-LR1P0C2J3 YBR230W-AYBR230W-A 201 nt9.35□□□□□ -0.91
TY2B-LR1P0C2J3 MET2YNL277W 1461 nt9.34□□□□□ -0.91
TY2B-LR1P0C2J3 SEC20YDR498C 1152 nt9.34□□□□□ -0.91
TY2B-LR1P0C2J3 tX(XXX)DtX(XXX)D 100 nt9.34□□□□□ -0.91
TY2B-LR1P0C2J3 YNR014WYNR014W 639 nt9.34□□□□□ -0.91
TY2B-LR1P0C2J3 MRPS16YPL013C 366 nt9.34□□□□□ -0.91
TY2B-LR1P0C2J3 NUD1YOR373W 2556 nt9.33□□□□□ -0.92
TY2B-LR1P0C2J3 tR(ACG)DtR(ACG)D 73 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 tR(ACG)EtR(ACG)E 73 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 tR(ACG)KtR(ACG)K 73 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 tR(ACG)LtR(ACG)L 73 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 tR(ACG)OtR(ACG)O 73 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 RPL21AYBR191W 483 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 HSM3YBR272C 1443 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 UFD1YGR048W 1086 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 ICT1YLR099C 1185 nt9.32□□□□□ -0.92
TY2B-LR1P0C2J3 RFC1YOR217W 2586 nt9.31□□□□□ -0.92
TY2B-LR1P0C2J3 SLA2YNL243W 2907 nt9.31□□□□□ -0.92
TY2B-LR1P0C2J3 RPS9AYPL081W 594 nt9.31□□□□□ -0.92
TY2B-LR1P0C2J3 GAA1YLR088W 1845 nt9.3□□□□□ -0.92
TY2B-LR1P0C2J3 TRR1YDR353W 960 nt9.3□□□□□ -0.92
TY2B-LR1P0C2J3 ATG4YNL223W 1485 nt9.3□□□□□ -0.92
TY2B-LR1P0C2J3 YMR119W-AYMR119W-A 375 nt9.29□□□□□ -0.92
TY2B-LR1P0C2J3 APE3YBR286W 1614 nt9.29□□□□□ -0.92
TY2B-LR1P0C2J3 WHI2YOR043W 1461 nt9.29□□□□□ -0.92
TY2B-LR1P0C2J3 YFL064CYFL064C 525 nt9.29□□□□□ -0.92
TY2B-LR1P0C2J3 LDS1YAL018C 978 nt9.29□□□□□ -0.92
TY2B-LR1P0C2J3 YPR202WYPR202W 717 nt9.29□□□□□ -0.92
TY2B-LR1P0C2J3 HDA1YNL021W 2121 nt9.28□□□□□ -0.92
TY2B-LR1P0C2J3 AIM34YMR003W 597 nt9.28□□□□□ -0.92
TY2B-LR1P0C2J3 BSC4YNL269W 396 nt9.28□□□□□ -0.92
TY2B-LR1P0C2J3 GUD1YDL238C 1470 nt9.28□□□□□ -0.92
TY2B-LR1P0C2J3 MCH2YKL221W 1422 nt9.27□□□□□ -0.92
TY2B-LR1P0C2J3 MLC1YGL106W 450 nt9.27□□□□□ -0.92
TY2B-LR1P0C2J3 YKR032WYKR032W 315 nt9.27□□□□□ -0.92
TY2B-LR1P0C2J3 ATG33YLR356W 594 nt9.27□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 21.4 ms