Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 MDM31YHR194W 1740 nt9.37□□□□□ -0.91
TY1B-PR3P0C2J1 MDH3YDL078C 1032 nt9.37□□□□□ -0.91
TY1B-PR3P0C2J1 YDL085C-AYDL085C-A 207 nt9.37□□□□□ -0.91
TY1B-PR3P0C2J1 ERG3YLR056W 1098 nt9.37□□□□□ -0.91
TY1B-PR3P0C2J1 SEC24YIL109C 2781 nt9.37□□□□□ -0.91
TY1B-PR3P0C2J1 KNH1YDL049C 807 nt9.36□□□□□ -0.91
TY1B-PR3P0C2J1 HXK1YFR053C 1458 nt9.36□□□□□ -0.91
TY1B-PR3P0C2J1 PRI2YKL045W 1587 nt9.36□□□□□ -0.91
TY1B-PR3P0C2J1 AIM24YJR080C 1185 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 YNL019CYNL019C 855 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 YNL033WYNL033W 855 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 UBC11YOR339C 471 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 LCB3YJL134W 1230 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 POP5YAL033W 522 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 PSY4YBL046W 1326 nt9.35□□□□□ -0.91
TY1B-PR3P0C2J1 TMT1YER175C 900 nt9.34□□□□□ -0.91
TY1B-PR3P0C2J1 SPE4YLR146C 903 nt9.34□□□□□ -0.91
TY1B-PR3P0C2J1 IES2YNL215W 963 nt9.34□□□□□ -0.91
TY1B-PR3P0C2J1 PRB1YEL060C 1908 nt9.33□□□□□ -0.92
TY1B-PR3P0C2J1 ARP2YDL029W 1176 nt9.33□□□□□ -0.92
TY1B-PR3P0C2J1 CBP4YGR174C 513 nt9.33□□□□□ -0.92
TY1B-PR3P0C2J1 TOS6YNL300W 309 nt9.33□□□□□ -0.92
TY1B-PR3P0C2J1 YPR114WYPR114W 948 nt9.33□□□□□ -0.92
TY1B-PR3P0C2J1 ARR3YPR201W 1215 nt9.33□□□□□ -0.92
TY1B-PR3P0C2J1 YDL114WYDL114W 927 nt9.32□□□□□ -0.92
TY1B-PR3P0C2J1 YLR123CYLR123C 330 nt9.32□□□□□ -0.92
TY1B-PR3P0C2J1 HAP3YBL021C 435 nt9.32□□□□□ -0.92
TY1B-PR3P0C2J1 MRPL36YBR122C 534 nt9.32□□□□□ -0.92
TY1B-PR3P0C2J1 MIP1YOR330C 3765 nt9.32□□□□□ -0.92
TY1B-PR3P0C2J1 YJL225CYJL225C 5277 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 YLL066CYLL066C 3618 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 YLL067CYLL067C 3618 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 CDC34YDR054C 888 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 YDR415CYDR415C 1125 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 YFR034W-AYFR034W-A 288 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 UTR2YEL040W 1404 nt9.31□□□□□ -0.92
TY1B-PR3P0C2J1 TKL2YBR117C 2046 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 RRP4YHR069C 1080 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 GCN3YKR026C 918 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 TSA1YML028W 591 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 HSP26YBR072W 645 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 RAD24YER173W 1980 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 YJR015WYJR015W 1533 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 MCH1YDL054C 1461 nt9.3□□□□□ -0.92
TY1B-PR3P0C2J1 YEL068CYEL068C 333 nt9.29□□□□□ -0.92
TY1B-PR3P0C2J1 ERI1YPL096C-A 207 nt9.29□□□□□ -0.92
TY1B-PR3P0C2J1 YMR155WYMR155W 1644 nt9.29□□□□□ -0.92
TY1B-PR3P0C2J1 YKL031WYKL031W 414 nt9.29□□□□□ -0.92
TY1B-PR3P0C2J1 RGT2YDL138W 2292 nt9.28□□□□□ -0.92
TY1B-PR3P0C2J1 YER137CYER137C 447 nt9.28□□□□□ -0.92
TY1B-PR3P0C2J1 PMA2YPL036W 2844 nt9.28□□□□□ -0.92
TY1B-PR3P0C2J1 YIR042CYIR042C 711 nt9.27□□□□□ -0.93
TY1B-PR3P0C2J1 YAL056C-AYAL056C-A 351 nt9.27□□□□□ -0.93
TY1B-PR3P0C2J1 CNE1YAL058W 1509 nt9.26□□□□□ -0.93
TY1B-PR3P0C2J1 YJR107WYJR107W 987 nt9.26□□□□□ -0.93
TY1B-PR3P0C2J1 MCM3YEL032W 2916 nt9.26□□□□□ -0.93
TY1B-PR3P0C2J1 PRC1YMR297W 1599 nt9.25□□□□□ -0.93
TY1B-PR3P0C2J1 PEX13YLR191W 1161 nt9.24□□□□□ -0.93
TY1B-PR3P0C2J1 SFC1YJR095W 969 nt9.24□□□□□ -0.93
TY1B-PR3P0C2J1 CCP1YKR066C 1086 nt9.24□□□□□ -0.93
TY1B-PR3P0C2J1 MDL2YPL270W 2322 nt9.23□□□□□ -0.93
TY1B-PR3P0C2J1 CHA1YCL064C 1083 nt9.22□□□□□ -0.93
TY1B-PR3P0C2J1 CAR1YPL111W 1002 nt9.22□□□□□ -0.93
TY1B-PR3P0C2J1 NUD1YOR373W 2556 nt9.22□□□□□ -0.93
TY1B-PR3P0C2J1 tX(XXX)DtX(XXX)D 100 nt9.22□□□□□ -0.93
TY1B-PR3P0C2J1 YBR230W-AYBR230W-A 201 nt9.21□□□□□ -0.94
TY1B-PR3P0C2J1 MET2YNL277W 1461 nt9.21□□□□□ -0.94
TY1B-PR3P0C2J1 MRPS16YPL013C 366 nt9.2□□□□□ -0.94
TY1B-PR3P0C2J1 RFC1YOR217W 2586 nt9.2□□□□□ -0.94
TY1B-PR3P0C2J1 ARC35YNR035C 1029 nt9.19□□□□□ -0.94
TY1B-PR3P0C2J1 HSM3YBR272C 1443 nt9.19□□□□□ -0.94
TY1B-PR3P0C2J1 SEC20YDR498C 1152 nt9.19□□□□□ -0.94
TY1B-PR3P0C2J1 GAA1YLR088W 1845 nt9.18□□□□□ -0.94
TY1B-PR3P0C2J1 YFL064CYFL064C 525 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 tR(ACG)DtR(ACG)D 73 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 tR(ACG)EtR(ACG)E 73 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 tR(ACG)KtR(ACG)K 73 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 tR(ACG)LtR(ACG)L 73 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 tR(ACG)OtR(ACG)O 73 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 YNR014WYNR014W 639 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 YPR202WYPR202W 717 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 RPL21AYBR191W 483 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 ICT1YLR099C 1185 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 RPS9AYPL081W 594 nt9.17□□□□□ -0.94
TY1B-PR3P0C2J1 ATG4YNL223W 1485 nt9.16□□□□□ -0.94
TY1B-PR3P0C2J1 LDS1YAL018C 978 nt9.16□□□□□ -0.94
TY1B-PR3P0C2J1 ATG33YLR356W 594 nt9.16□□□□□ -0.94
TY1B-PR3P0C2J1 SOG2YOR353C 2376 nt9.16□□□□□ -0.94
TY1B-PR3P0C2J1 TRR1YDR353W 960 nt9.15□□□□□ -0.94
TY1B-PR3P0C2J1 UFD1YGR048W 1086 nt9.15□□□□□ -0.94
TY1B-PR3P0C2J1 APE3YBR286W 1614 nt9.15□□□□□ -0.95
TY1B-PR3P0C2J1 HDA1YNL021W 2121 nt9.15□□□□□ -0.95
TY1B-PR3P0C2J1 MLC1YGL106W 450 nt9.14□□□□□ -0.95
TY1B-PR3P0C2J1 YMR119W-AYMR119W-A 375 nt9.14□□□□□ -0.95
TY1B-PR3P0C2J1 WHI2YOR043W 1461 nt9.14□□□□□ -0.95
TY1B-PR3P0C2J1 YKR032WYKR032W 315 nt9.14□□□□□ -0.95
TY1B-PR3P0C2J1 BSC4YNL269W 396 nt9.14□□□□□ -0.95
TY1B-PR3P0C2J1 COX16YJL003W 357 nt9.13□□□□□ -0.95
TY1B-PR3P0C2J1 YGL235WYGL235W 537 nt9.12□□□□□ -0.95
TY1B-PR3P0C2J1 KTR1YOR099W 1182 nt9.12□□□□□ -0.95
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms