Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TPM3P06753 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.94■■□□□ 1.9
TPM3P06753 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.94■■□□□ 1.9
TPM3P06753 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TPM3P06753 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TPM3P06753 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TPM3P06753 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.94■■□□□ 1.9
TPM3P06753 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
TPM3P06753 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TPM3P06753 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TPM3P06753 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.93■■□□□ 1.9
TPM3P06753 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC26.93■■□□□ 1.9
TPM3P06753 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
TPM3P06753 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.93■■□□□ 1.9
TPM3P06753 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TPM3P06753 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TPM3P06753 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
TPM3P06753 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TPM3P06753 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TPM3P06753 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TPM3P06753 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
TPM3P06753 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
TPM3P06753 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TPM3P06753 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TPM3P06753 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.92■■□□□ 1.9
TPM3P06753 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TPM3P06753 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TPM3P06753 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TPM3P06753 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
TPM3P06753 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TPM3P06753 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TPM3P06753 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
TPM3P06753 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
TPM3P06753 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
TPM3P06753 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
TPM3P06753 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
TPM3P06753 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
TPM3P06753 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.88■■□□□ 1.89
TPM3P06753 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
TPM3P06753 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC26.88■■□□□ 1.89
TPM3P06753 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TPM3P06753 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TPM3P06753 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TPM3P06753 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
TPM3P06753 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TPM3P06753 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
TPM3P06753 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.87■■□□□ 1.89
TPM3P06753 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.86■■□□□ 1.89
TPM3P06753 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
TPM3P06753 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TPM3P06753 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
TPM3P06753 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TPM3P06753 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
TPM3P06753 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
TPM3P06753 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TPM3P06753 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TPM3P06753 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.84■■□□□ 1.89
TPM3P06753 LINC00543-201ENST00000567234 1845 ntBASIC26.84■■□□□ 1.89
TPM3P06753 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
TPM3P06753 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TPM3P06753 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TPM3P06753 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.84■■□□□ 1.89
TPM3P06753 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TPM3P06753 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TPM3P06753 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
TPM3P06753 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.83■■□□□ 1.89
TPM3P06753 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.83■■□□□ 1.89
TPM3P06753 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.83■■□□□ 1.89
TPM3P06753 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
TPM3P06753 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.83■■□□□ 1.88
TPM3P06753 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.88
TPM3P06753 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.82■■□□□ 1.88
TPM3P06753 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.82■■□□□ 1.88
TPM3P06753 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.82■■□□□ 1.88
TPM3P06753 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TPM3P06753 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
TPM3P06753 AC087741.3-201ENST00000624270 1347 ntBASIC26.82■■□□□ 1.88
TPM3P06753 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TPM3P06753 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.82■■□□□ 1.88
TPM3P06753 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
TPM3P06753 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
TPM3P06753 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
TPM3P06753 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
TPM3P06753 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
TPM3P06753 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
TPM3P06753 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
TPM3P06753 AC068473.5-201ENST00000616428 2072 ntBASIC26.8■■□□□ 1.88
TPM3P06753 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.8■■□□□ 1.88
TPM3P06753 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TPM3P06753 AC044849.2-201ENST00000606596 710 ntBASIC26.8■■□□□ 1.88
TPM3P06753 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TPM3P06753 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
TPM3P06753 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TPM3P06753 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.79■■□□□ 1.88
TPM3P06753 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TPM3P06753 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
TPM3P06753 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TPM3P06753 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
TPM3P06753 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
TPM3P06753 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.78■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms