Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ALX4Q9H161 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.49■□□□□ 0.87
ALX4Q9H161 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.49■□□□□ 0.87
ALX4Q9H161 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ALX4Q9H161 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX4Q9H161 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ALX4Q9H161 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ALX4Q9H161 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.49■□□□□ 0.87
ALX4Q9H161 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.48■□□□□ 0.87
ALX4Q9H161 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.48■□□□□ 0.87
ALX4Q9H161 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.48■□□□□ 0.87
ALX4Q9H161 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
ALX4Q9H161 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ALX4Q9H161 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ALX4Q9H161 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ALX4Q9H161 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX4Q9H161 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX4Q9H161 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ALX4Q9H161 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX4Q9H161 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.47■□□□□ 0.87
ALX4Q9H161 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX4Q9H161 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ALX4Q9H161 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ALX4Q9H161 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX4Q9H161 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ALX4Q9H161 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX4Q9H161 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX4Q9H161 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.46■□□□□ 0.87
ALX4Q9H161 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ALX4Q9H161 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX4Q9H161 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
ALX4Q9H161 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ALX4Q9H161 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX4Q9H161 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX4Q9H161 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX4Q9H161 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX4Q9H161 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ALX4Q9H161 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.44■□□□□ 0.86
ALX4Q9H161 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ALX4Q9H161 WHAMMP3-201ENST00000611636 1609 ntBASIC20.43■□□□□ 0.86
ALX4Q9H161 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALX4Q9H161 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ALX4Q9H161 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.43■□□□□ 0.86
ALX4Q9H161 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALX4Q9H161 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ALX4Q9H161 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ALX4Q9H161 WHAMMP2-203ENST00000563942 1603 ntBASIC20.42■□□□□ 0.86
ALX4Q9H161 LINC00543-201ENST00000567234 1845 ntBASIC20.42■□□□□ 0.86
ALX4Q9H161 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ALX4Q9H161 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.42■□□□□ 0.86
ALX4Q9H161 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.42■□□□□ 0.86
ALX4Q9H161 MIR6090-201ENST00000622481 60 ntBASIC20.42■□□□□ 0.86
ALX4Q9H161 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALX4Q9H161 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
ALX4Q9H161 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ALX4Q9H161 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.42■□□□□ 0.86
ALX4Q9H161 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALX4Q9H161 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALX4Q9H161 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALX4Q9H161 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALX4Q9H161 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.41■□□□□ 0.86
ALX4Q9H161 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.41■□□□□ 0.86
ALX4Q9H161 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ALX4Q9H161 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ALX4Q9H161 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.4■□□□□ 0.86
ALX4Q9H161 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
ALX4Q9H161 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ALX4Q9H161 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
ALX4Q9H161 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ALX4Q9H161 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ALX4Q9H161 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.39■□□□□ 0.85
ALX4Q9H161 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.39■□□□□ 0.85
ALX4Q9H161 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ALX4Q9H161 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ALX4Q9H161 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.39■□□□□ 0.85
ALX4Q9H161 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ALX4Q9H161 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALX4Q9H161 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALX4Q9H161 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALX4Q9H161 AC108673.1-201ENST00000510422 1159 ntBASIC20.38■□□□□ 0.85
ALX4Q9H161 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ALX4Q9H161 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALX4Q9H161 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ALX4Q9H161 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.38■□□□□ 0.85
ALX4Q9H161 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ALX4Q9H161 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ALX4Q9H161 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ALX4Q9H161 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms