Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCC1Q96S66 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCC1Q96S66 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.35■□□□□ 0.85
CLCC1Q96S66 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLCC1Q96S66 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLCC1Q96S66 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLCC1Q96S66 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCC1Q96S66 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCC1Q96S66 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CLCC1Q96S66 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.34■□□□□ 0.85
CLCC1Q96S66 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CLCC1Q96S66 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCC1Q96S66 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCC1Q96S66 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLCC1Q96S66 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 AP002414.2-202ENST00000590929 1450 ntBASIC20.33■□□□□ 0.85
CLCC1Q96S66 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.33■□□□□ 0.85
CLCC1Q96S66 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.33■□□□□ 0.84
CLCC1Q96S66 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CLCC1Q96S66 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCC1Q96S66 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCC1Q96S66 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.32■□□□□ 0.84
CLCC1Q96S66 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCC1Q96S66 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCC1Q96S66 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCC1Q96S66 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLCC1Q96S66 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
CLCC1Q96S66 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCC1Q96S66 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCC1Q96S66 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCC1Q96S66 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCC1Q96S66 AC020928.2-201ENST00000588717 2197 ntBASIC20.3■□□□□ 0.84
CLCC1Q96S66 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCC1Q96S66 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CLCC1Q96S66 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLCC1Q96S66 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.3■□□□□ 0.84
CLCC1Q96S66 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.3■□□□□ 0.84
CLCC1Q96S66 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCC1Q96S66 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCC1Q96S66 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCC1Q96S66 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCC1Q96S66 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCC1Q96S66 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCC1Q96S66 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCC1Q96S66 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLCC1Q96S66 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCC1Q96S66 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCC1Q96S66 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCC1Q96S66 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCC1Q96S66 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.27■□□□□ 0.84
CLCC1Q96S66 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCC1Q96S66 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCC1Q96S66 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLCC1Q96S66 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLCC1Q96S66 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCC1Q96S66 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCC1Q96S66 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLCC1Q96S66 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CLCC1Q96S66 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCC1Q96S66 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCC1Q96S66 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLCC1Q96S66 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCC1Q96S66 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CLCC1Q96S66 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLCC1Q96S66 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCC1Q96S66 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCC1Q96S66 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLCC1Q96S66 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCC1Q96S66 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCC1Q96S66 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCC1Q96S66 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLCC1Q96S66 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLCC1Q96S66 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.23■□□□□ 0.83
CLCC1Q96S66 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLCC1Q96S66 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCC1Q96S66 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCC1Q96S66 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCC1Q96S66 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCC1Q96S66 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CLCC1Q96S66 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCC1Q96S66 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCC1Q96S66 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCC1Q96S66 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCC1Q96S66 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCC1Q96S66 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms