Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
EXD3Q8N9H8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
EXD3Q8N9H8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.16■■□□□ 1.3
EXD3Q8N9H8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
EXD3Q8N9H8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
EXD3Q8N9H8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
EXD3Q8N9H8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
EXD3Q8N9H8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 PVT1_1.1-201ENST00000615125 194 ntBASIC23.15■■□□□ 1.3
EXD3Q8N9H8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
EXD3Q8N9H8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
EXD3Q8N9H8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
EXD3Q8N9H8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
EXD3Q8N9H8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.14■■□□□ 1.29
EXD3Q8N9H8 AC139795.1-202ENST00000500444 432 ntBASIC23.14■■□□□ 1.29
EXD3Q8N9H8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
EXD3Q8N9H8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.14■■□□□ 1.29
EXD3Q8N9H8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.14■■□□□ 1.29
EXD3Q8N9H8 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
EXD3Q8N9H8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.13■■□□□ 1.29
EXD3Q8N9H8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
EXD3Q8N9H8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
EXD3Q8N9H8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
EXD3Q8N9H8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
EXD3Q8N9H8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
EXD3Q8N9H8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.12■■□□□ 1.29
EXD3Q8N9H8 AC025884.2-201ENST00000553429 711 ntBASIC23.12■■□□□ 1.29
EXD3Q8N9H8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
EXD3Q8N9H8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
EXD3Q8N9H8 RAP2CP1-202ENST00000605179 643 ntBASIC23.11■■□□□ 1.29
EXD3Q8N9H8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 AC093536.1-201ENST00000569153 554 ntBASIC23.1■■□□□ 1.29
EXD3Q8N9H8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
EXD3Q8N9H8 AL359258.2-201ENST00000564063 1566 ntBASIC23.1■■□□□ 1.29
EXD3Q8N9H8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 AL356441.2-201ENST00000443009 864 ntBASIC23.09■■□□□ 1.29
EXD3Q8N9H8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
EXD3Q8N9H8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 AP004833.2-201ENST00000532228 1454 ntBASIC23.08■■□□□ 1.29
EXD3Q8N9H8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
EXD3Q8N9H8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.08■■□□□ 1.28
EXD3Q8N9H8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
EXD3Q8N9H8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.07■■□□□ 1.28
EXD3Q8N9H8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.07■■□□□ 1.28
EXD3Q8N9H8 MIR6765-201ENST00000614092 87 ntBASIC23.07■■□□□ 1.28
EXD3Q8N9H8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
EXD3Q8N9H8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
EXD3Q8N9H8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
EXD3Q8N9H8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
EXD3Q8N9H8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
EXD3Q8N9H8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
EXD3Q8N9H8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
EXD3Q8N9H8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
EXD3Q8N9H8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
EXD3Q8N9H8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
EXD3Q8N9H8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
EXD3Q8N9H8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 MIR4508-201ENST00000584178 70 ntBASIC23.04■■□□□ 1.28
EXD3Q8N9H8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
EXD3Q8N9H8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
EXD3Q8N9H8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
EXD3Q8N9H8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.03■■□□□ 1.28
EXD3Q8N9H8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.03■■□□□ 1.28
EXD3Q8N9H8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.03■■□□□ 1.28
EXD3Q8N9H8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
EXD3Q8N9H8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms