Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC28.22■■■□□ 2.11
PPARGC1BQ86YN6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPARGC1BQ86YN6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PPARGC1BQ86YN6 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC28.22■■■□□ 2.11
PPARGC1BQ86YN6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 AC138028.4-201ENST00000564984 1845 ntBASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 AL645929.1-201ENST00000420084 975 ntBASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PPARGC1BQ86YN6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
PPARGC1BQ86YN6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.2■■■□□ 2.11
PPARGC1BQ86YN6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
PPARGC1BQ86YN6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
PPARGC1BQ86YN6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 KRT18P48-201ENST00000434763 852 ntBASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 AC009065.1-201ENST00000564055 1225 ntBASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC28.2■■■□□ 2.1
PPARGC1BQ86YN6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 PCED1CP-201ENST00000419887 785 ntBASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC28.19■■■□□ 2.1
PPARGC1BQ86YN6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 LINC01238-205ENST00000567549 1107 ntBASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC28.18■■■□□ 2.1
PPARGC1BQ86YN6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PPARGC1BQ86YN6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms