Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 KRT18P13-201ENST00000400056 1290 ntBASIC17.6■□□□□ 0.41
THSD1Q9NS62 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.6■□□□□ 0.41
THSD1Q9NS62 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
THSD1Q9NS62 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 RCC2P3-201ENST00000418112 1537 ntBASIC17.59■□□□□ 0.41
THSD1Q9NS62 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 AL592071.1-201ENST00000611956 408 ntBASIC17.59■□□□□ 0.41
THSD1Q9NS62 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 REXO1L6P-202ENST00000619970 1078 ntBASIC17.59■□□□□ 0.41
THSD1Q9NS62 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
THSD1Q9NS62 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
THSD1Q9NS62 NOC2LP2-201ENST00000407594 1944 ntBASIC17.59■□□□□ 0.41
THSD1Q9NS62 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
THSD1Q9NS62 AC073592.3-201ENST00000625118 1834 ntBASIC17.58■□□□□ 0.41
THSD1Q9NS62 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
THSD1Q9NS62 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
THSD1Q9NS62 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
THSD1Q9NS62 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THSD1Q9NS62 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
THSD1Q9NS62 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.58■□□□□ 0.41
THSD1Q9NS62 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 IGHV3-47-201ENST00000425060 335 ntBASIC17.58■□□□□ 0.4
THSD1Q9NS62 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 AP001005.1-201ENST00000571755 1248 ntBASIC17.58■□□□□ 0.4
THSD1Q9NS62 MIR3180-4-201ENST00000582223 153 ntBASIC17.58■□□□□ 0.4
THSD1Q9NS62 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 AC139530.3-201ENST00000620344 690 ntBASIC17.58■□□□□ 0.4
THSD1Q9NS62 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.58■□□□□ 0.4
THSD1Q9NS62 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
THSD1Q9NS62 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
THSD1Q9NS62 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.57■□□□□ 0.4
THSD1Q9NS62 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 TSPY12P-201ENST00000421279 868 ntBASIC17.57■□□□□ 0.4
THSD1Q9NS62 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.57■□□□□ 0.4
THSD1Q9NS62 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
THSD1Q9NS62 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms