Protein–RNA interactions for Protein: Q53H54

TRMT12, tRNA wybutosine-synthesizing protein 2 homolog, humanhuman

Known RBP Predictions only

Length 448 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12Q53H54 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRMT12Q53H54 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
TRMT12Q53H54 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TRMT12Q53H54 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRMT12Q53H54 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.9■□□□□ 0.3
TRMT12Q53H54 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRMT12Q53H54 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRMT12Q53H54 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 AP003733.1-201ENST00000491725 852 ntBASIC16.89■□□□□ 0.29
TRMT12Q53H54 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 AC004263.2-201ENST00000617183 678 ntBASIC16.89■□□□□ 0.29
TRMT12Q53H54 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.89■□□□□ 0.29
TRMT12Q53H54 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRMT12Q53H54 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 NOC2LP2-201ENST00000407594 1944 ntBASIC16.88■□□□□ 0.29
TRMT12Q53H54 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 AC068880.1-201ENST00000507289 2297 ntBASIC16.88■□□□□ 0.29
TRMT12Q53H54 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 AL031133.1-201ENST00000406807 723 ntBASIC16.88■□□□□ 0.29
TRMT12Q53H54 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 AC008764.6-201ENST00000595909 2069 ntBASIC16.88■□□□□ 0.29
TRMT12Q53H54 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRMT12Q53H54 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRMT12Q53H54 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRMT12Q53H54 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.87■□□□□ 0.29
TRMT12Q53H54 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.87■□□□□ 0.29
TRMT12Q53H54 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms