Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.53■■□□□ 1.68
FOXR1Q6PIV2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
FOXR1Q6PIV2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
FOXR1Q6PIV2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
FOXR1Q6PIV2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC25.52■■□□□ 1.68
FOXR1Q6PIV2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
FOXR1Q6PIV2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.52■■□□□ 1.68
FOXR1Q6PIV2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
FOXR1Q6PIV2 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
FOXR1Q6PIV2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.51■■□□□ 1.67
FOXR1Q6PIV2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
FOXR1Q6PIV2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
FOXR1Q6PIV2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
FOXR1Q6PIV2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
FOXR1Q6PIV2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.5■■□□□ 1.67
FOXR1Q6PIV2 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
FOXR1Q6PIV2 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
FOXR1Q6PIV2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
FOXR1Q6PIV2 LINC01971-201ENST00000617888 1048 ntBASIC25.5■■□□□ 1.67
FOXR1Q6PIV2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.49■■□□□ 1.67
FOXR1Q6PIV2 CR559946.2-201ENST00000623684 991 ntBASIC25.49■■□□□ 1.67
FOXR1Q6PIV2 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
FOXR1Q6PIV2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.49■■□□□ 1.67
FOXR1Q6PIV2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.49■■□□□ 1.67
FOXR1Q6PIV2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
FOXR1Q6PIV2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
FOXR1Q6PIV2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
FOXR1Q6PIV2 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
FOXR1Q6PIV2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
FOXR1Q6PIV2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
FOXR1Q6PIV2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 HSD17B1P1-201ENST00000590052 955 ntBASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
FOXR1Q6PIV2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
FOXR1Q6PIV2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
FOXR1Q6PIV2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
FOXR1Q6PIV2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.43■■□□□ 1.66
FOXR1Q6PIV2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
FOXR1Q6PIV2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
FOXR1Q6PIV2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
FOXR1Q6PIV2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
FOXR1Q6PIV2 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
FOXR1Q6PIV2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
FOXR1Q6PIV2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
FOXR1Q6PIV2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.41■■□□□ 1.66
FOXR1Q6PIV2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.41■■□□□ 1.66
FOXR1Q6PIV2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
FOXR1Q6PIV2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
FOXR1Q6PIV2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.39■■□□□ 1.65
FOXR1Q6PIV2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
FOXR1Q6PIV2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXR1Q6PIV2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXR1Q6PIV2 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.38■■□□□ 1.65
FOXR1Q6PIV2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
FOXR1Q6PIV2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXR1Q6PIV2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXR1Q6PIV2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.37■■□□□ 1.65
FOXR1Q6PIV2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXR1Q6PIV2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXR1Q6PIV2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
FOXR1Q6PIV2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.36■■□□□ 1.65
FOXR1Q6PIV2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.36■■□□□ 1.65
FOXR1Q6PIV2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.36■■□□□ 1.65
FOXR1Q6PIV2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXR1Q6PIV2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
FOXR1Q6PIV2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms