Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNX30Q5VWJ9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNX30Q5VWJ9 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 NTF6A-201ENST00000591175 560 ntBASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SNX30Q5VWJ9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SNX30Q5VWJ9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.98■■□□□ 1.75
SNX30Q5VWJ9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNX30Q5VWJ9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNX30Q5VWJ9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.97■■□□□ 1.75
SNX30Q5VWJ9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.97■■□□□ 1.75
SNX30Q5VWJ9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SNX30Q5VWJ9 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNX30Q5VWJ9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNX30Q5VWJ9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNX30Q5VWJ9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.96■■□□□ 1.75
SNX30Q5VWJ9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNX30Q5VWJ9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.95■■□□□ 1.75
SNX30Q5VWJ9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.95■■□□□ 1.75
SNX30Q5VWJ9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 AC025884.2-201ENST00000553429 711 ntBASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SNX30Q5VWJ9 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.94■■□□□ 1.74
SNX30Q5VWJ9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SNX30Q5VWJ9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
SNX30Q5VWJ9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.94■■□□□ 1.74
SNX30Q5VWJ9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.94■■□□□ 1.74
SNX30Q5VWJ9 SMPD5-203ENST00000639008 1464 ntBASIC25.93■■□□□ 1.74
SNX30Q5VWJ9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SNX30Q5VWJ9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.92■■□□□ 1.74
SNX30Q5VWJ9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SNX30Q5VWJ9 AC007029.1-201ENST00000604183 313 ntBASIC25.92■■□□□ 1.74
SNX30Q5VWJ9 U85056.1-201ENST00000616429 682 ntBASIC25.92■■□□□ 1.74
SNX30Q5VWJ9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC25.92■■□□□ 1.74
SNX30Q5VWJ9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNX30Q5VWJ9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.91■■□□□ 1.74
SNX30Q5VWJ9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC25.91■■□□□ 1.74
SNX30Q5VWJ9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNX30Q5VWJ9 WHAMMP3-201ENST00000611636 1609 ntBASIC25.91■■□□□ 1.74
SNX30Q5VWJ9 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNX30Q5VWJ9 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNX30Q5VWJ9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNX30Q5VWJ9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.89■■□□□ 1.74
SNX30Q5VWJ9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SNX30Q5VWJ9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SNX30Q5VWJ9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNX30Q5VWJ9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SNX30Q5VWJ9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNX30Q5VWJ9 AC135731.1-201ENST00000569415 2548 ntBASIC25.88■■□□□ 1.73
SNX30Q5VWJ9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.88■■□□□ 1.73
SNX30Q5VWJ9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.88■■□□□ 1.73
SNX30Q5VWJ9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 LINC01003-201ENST00000564834 1764 ntBASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
SNX30Q5VWJ9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.86■■□□□ 1.73
SNX30Q5VWJ9 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
SNX30Q5VWJ9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.86■■□□□ 1.73
SNX30Q5VWJ9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
SNX30Q5VWJ9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC25.86■■□□□ 1.73
SNX30Q5VWJ9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
SNX30Q5VWJ9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNX30Q5VWJ9 AC142086.6-201ENST00000621154 1765 ntBASIC25.84■■□□□ 1.73
SNX30Q5VWJ9 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
SNX30Q5VWJ9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC25.84■■□□□ 1.73
SNX30Q5VWJ9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SNX30Q5VWJ9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.83■■□□□ 1.73
SNX30Q5VWJ9 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC25.83■■□□□ 1.73
SNX30Q5VWJ9 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SNX30Q5VWJ9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.83■■□□□ 1.73
SNX30Q5VWJ9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNX30Q5VWJ9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNX30Q5VWJ9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
SNX30Q5VWJ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNX30Q5VWJ9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SNX30Q5VWJ9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SNX30Q5VWJ9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
SNX30Q5VWJ9 AL359504.2-201ENST00000605506 1601 ntBASIC25.8■■□□□ 1.72
SNX30Q5VWJ9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNX30Q5VWJ9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 KRT18P60-201ENST00000312876 1297 ntBASIC25.79■■□□□ 1.72
SNX30Q5VWJ9 RP9P-202ENST00000450133 1212 ntBASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms