Protein–RNA interactions for Protein: P38319

TDP1, Tyrosyl-DNA phosphodiesterase 1, yeastyeast

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDP1P38319 MTR3YGR158C 753 nt6.85□□□□□ -1.31
TDP1P38319 YJL211CYJL211C 444 nt6.85□□□□□ -1.31
TDP1P38319 ARC35YNR035C 1029 nt6.85□□□□□ -1.31
TDP1P38319 CCT3YJL014W 1605 nt6.85□□□□□ -1.31
TDP1P38319 EHD3YDR036C 1503 nt6.85□□□□□ -1.31
TDP1P38319 IRC5YFR038W 2562 nt6.84□□□□□ -1.31
TDP1P38319 SGE1YPR198W 1632 nt6.84□□□□□ -1.31
TDP1P38319 PET117YER058W 324 nt6.84□□□□□ -1.31
TDP1P38319 SWP1YMR149W 861 nt6.84□□□□□ -1.31
TDP1P38319 PET20YPL159C 762 nt6.84□□□□□ -1.31
TDP1P38319 TAH11YJR046W 1815 nt6.83□□□□□ -1.32
TDP1P38319 CEM1YER061C 1329 nt6.83□□□□□ -1.32
TDP1P38319 HOG1YLR113W 1308 nt6.83□□□□□ -1.32
TDP1P38319 CTA1YDR256C 1548 nt6.83□□□□□ -1.32
TDP1P38319 SLA2YNL243W 2907 nt6.83□□□□□ -1.32
TDP1P38319 ERS1YCR075C 783 nt6.83□□□□□ -1.32
TDP1P38319 BIM1YER016W 1035 nt6.83□□□□□ -1.32
TDP1P38319 MIX17YMR002W 471 nt6.83□□□□□ -1.32
TDP1P38319 RPL43AYPR043W 279 nt6.83□□□□□ -1.32
TDP1P38319 PET494YNR045W 1470 nt6.83□□□□□ -1.32
TDP1P38319 EEB1YPL095C 1371 nt6.82□□□□□ -1.32
TDP1P38319 MSG5YNL053W 1470 nt6.82□□□□□ -1.32
TDP1P38319 THR1YHR025W 1074 nt6.82□□□□□ -1.32
TDP1P38319 FUS3YBL016W 1062 nt6.82□□□□□ -1.32
TDP1P38319 MSI1YBR195C 1269 nt6.82□□□□□ -1.32
TDP1P38319 SDH8YBR269C 417 nt6.82□□□□□ -1.32
TDP1P38319 MEU1YLR017W 1014 nt6.81□□□□□ -1.32
TDP1P38319 PRE5YMR314W 705 nt6.81□□□□□ -1.32
TDP1P38319 DLD1YDL174C 1764 nt6.81□□□□□ -1.32
TDP1P38319 CIT2YCR005C 1383 nt6.81□□□□□ -1.32
TDP1P38319 snR78snR78 87 nt6.8□□□□□ -1.32
TDP1P38319 YDR476CYDR476C 675 nt6.8□□□□□ -1.32
TDP1P38319 HPT1YDR399W 666 nt6.79□□□□□ -1.32
TDP1P38319 SHO1YER118C 1104 nt6.79□□□□□ -1.32
TDP1P38319 HBN1YCL026C-B 582 nt6.79□□□□□ -1.32
TDP1P38319 YLL066CYLL066C 3618 nt6.79□□□□□ -1.32
TDP1P38319 MRPL28YDR462W 444 nt6.78□□□□□ -1.32
TDP1P38319 YGL081WYGL081W 963 nt6.78□□□□□ -1.32
TDP1P38319 RTC4YNL254C 1206 nt6.78□□□□□ -1.32
TDP1P38319 DPM1YPR183W 804 nt6.78□□□□□ -1.32
TDP1P38319 SKY1YMR216C 2229 nt6.78□□□□□ -1.32
TDP1P38319 ASN2YGR124W 1719 nt6.77□□□□□ -1.33
TDP1P38319 RPL2BYIL018W 765 nt6.77□□□□□ -1.33
TDP1P38319 YBR241CYBR241C 1467 nt6.77□□□□□ -1.33
TDP1P38319 YPL247CYPL247C 1572 nt6.77□□□□□ -1.33
TDP1P38319 YCR049CYCR049C 447 nt6.76□□□□□ -1.33
TDP1P38319 YBR226CYBR226C 411 nt6.76□□□□□ -1.33
TDP1P38319 HAL5YJL165C 2568 nt6.75□□□□□ -1.33
TDP1P38319 EMP65YER140W 1671 nt6.75□□□□□ -1.33
TDP1P38319 CDC16YKL022C 2523 nt6.75□□□□□ -1.33
TDP1P38319 YJL107CYJL107C 1164 nt6.75□□□□□ -1.33
TDP1P38319 AST1YBL069W 1290 nt6.75□□□□□ -1.33
TDP1P38319 YNR014WYNR014W 639 nt6.75□□□□□ -1.33
TDP1P38319 SMK1YPR054W 1167 nt6.75□□□□□ -1.33
TDP1P38319 YOS9YDR057W 1629 nt6.75□□□□□ -1.33
TDP1P38319 VBA5YKR105C 1749 nt6.74□□□□□ -1.33
TDP1P38319 DOC1YGL240W 753 nt6.74□□□□□ -1.33
TDP1P38319 RRN10YBL025W 438 nt6.74□□□□□ -1.33
TDP1P38319 YNL017CYNL017C 339 nt6.74□□□□□ -1.33
TDP1P38319 YNR068CYNR068C 819 nt6.74□□□□□ -1.33
TDP1P38319 NPL6YMR091C 1308 nt6.74□□□□□ -1.33
TDP1P38319 YAL045CYAL045C 309 nt6.73□□□□□ -1.33
TDP1P38319 RSP5YER125W 2430 nt6.73□□□□□ -1.33
TDP1P38319 HOS2YGL194C 1359 nt6.72□□□□□ -1.33
TDP1P38319 RRP46YGR095C 672 nt6.72□□□□□ -1.33
TDP1P38319 YML122CYML122C 381 nt6.72□□□□□ -1.33
TDP1P38319 YOL099CYOL099C 492 nt6.72□□□□□ -1.33
TDP1P38319 MIP1YOR330C 3765 nt6.71□□□□□ -1.33
TDP1P38319 RGD2YFL047W 2145 nt6.71□□□□□ -1.33
TDP1P38319 RBS1YDL189W 1374 nt6.71□□□□□ -1.33
TDP1P38319 PAC2YER007W 1557 nt6.71□□□□□ -1.34
TDP1P38319 VMA2YBR127C 1554 nt6.71□□□□□ -1.34
TDP1P38319 PZF1YPR186C 1290 nt6.71□□□□□ -1.34
TDP1P38319 TUF1YOR187W 1314 nt6.71□□□□□ -1.34
TDP1P38319 BUD9YGR041W 1644 nt6.7□□□□□ -1.34
TDP1P38319 TRS31YDR472W 852 nt6.7□□□□□ -1.34
TDP1P38319 RDN5-2RDN5-2 119 nt6.7□□□□□ -1.34
TDP1P38319 RDN5-3RDN5-3 119 nt6.7□□□□□ -1.34
TDP1P38319 RDN5-4RDN5-4 119 nt6.7□□□□□ -1.34
TDP1P38319 RDN5-5RDN5-5 119 nt6.7□□□□□ -1.34
TDP1P38319 URE2YNL229C 1065 nt6.7□□□□□ -1.34
TDP1P38319 NFS1YCL017C 1494 nt6.7□□□□□ -1.34
TDP1P38319 ELP3YPL086C 1674 nt6.7□□□□□ -1.34
TDP1P38319 RSM23YGL129C 1353 nt6.69□□□□□ -1.34
TDP1P38319 PPH22YDL188C 1134 nt6.69□□□□□ -1.34
TDP1P38319 COX16YJL003W 357 nt6.69□□□□□ -1.34
TDP1P38319 OPI11YPR044C 354 nt6.69□□□□□ -1.34
TDP1P38319 CLN1YMR199W 1641 nt6.68□□□□□ -1.34
TDP1P38319 BDF2YDL070W 1917 nt6.68□□□□□ -1.34
TDP1P38319 GFA1YKL104C 2154 nt6.68□□□□□ -1.34
TDP1P38319 ECM38YLR299W 1983 nt6.68□□□□□ -1.34
TDP1P38319 YIP4YGL198W 708 nt6.68□□□□□ -1.34
TDP1P38319 ORM1YGR038W 669 nt6.68□□□□□ -1.34
TDP1P38319 YLR358CYLR358C 564 nt6.68□□□□□ -1.34
TDP1P38319 OST3YOR085W 1053 nt6.68□□□□□ -1.34
TDP1P38319 YLL058WYLL058W 1728 nt6.67□□□□□ -1.34
TDP1P38319 YCR099CYCR099C 468 nt6.67□□□□□ -1.34
TDP1P38319 DAL7YIR031C 1665 nt6.66□□□□□ -1.34
TDP1P38319 YPQ2YDR352W 954 nt6.66□□□□□ -1.34
TDP1P38319 OPI8YKR035C 642 nt6.66□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 62.6 ms