Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 BX640515.1-201ENST00000617215 977 ntBASIC17.66■□□□□ 0.42
THSD1Q9NS62 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
THSD1Q9NS62 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
THSD1Q9NS62 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 MRPL3P1-201ENST00000400109 1033 ntBASIC17.65■□□□□ 0.42
THSD1Q9NS62 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 AC104390.1-201ENST00000555663 520 ntBASIC17.65■□□□□ 0.42
THSD1Q9NS62 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 AL390719.2-201ENST00000606993 987 ntBASIC17.65■□□□□ 0.42
THSD1Q9NS62 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
THSD1Q9NS62 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
THSD1Q9NS62 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
THSD1Q9NS62 AL109659.2-201ENST00000606809 1674 ntBASIC17.64■□□□□ 0.42
THSD1Q9NS62 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
THSD1Q9NS62 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.64■□□□□ 0.42
THSD1Q9NS62 HOXB1-202ENST00000577092 1414 ntBASIC17.64■□□□□ 0.42
THSD1Q9NS62 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 AL590627.1-203ENST00000421194 1026 ntBASIC17.64■□□□□ 0.41
THSD1Q9NS62 PMS2P1-201ENST00000431037 1228 ntBASIC17.64■□□□□ 0.41
THSD1Q9NS62 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.64■□□□□ 0.41
THSD1Q9NS62 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
THSD1Q9NS62 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.63■□□□□ 0.41
THSD1Q9NS62 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
THSD1Q9NS62 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
THSD1Q9NS62 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.63■□□□□ 0.41
THSD1Q9NS62 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
THSD1Q9NS62 SAPCD2P3-201ENST00000455031 850 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms