Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.86■□□□□ 0.13
SFTPBP07988 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.86■□□□□ 0.13
SFTPBP07988 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.86■□□□□ 0.13
SFTPBP07988 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 ABALON-201ENST00000629058 1903 ntBASIC15.86■□□□□ 0.13
SFTPBP07988 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SFTPBP07988 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.86■□□□□ 0.13
SFTPBP07988 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.85■□□□□ 0.13
SFTPBP07988 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.85■□□□□ 0.13
SFTPBP07988 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SFTPBP07988 AC012313.1-201ENST00000593393 3059 ntBASIC15.85■□□□□ 0.13
SFTPBP07988 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.85■□□□□ 0.13
SFTPBP07988 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
SFTPBP07988 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC15.85■□□□□ 0.13
SFTPBP07988 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.85■□□□□ 0.13
SFTPBP07988 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.85■□□□□ 0.13
SFTPBP07988 AP000692.2-201ENST00000608391 879 ntBASIC15.85■□□□□ 0.13
SFTPBP07988 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SFTPBP07988 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
SFTPBP07988 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.85■□□□□ 0.13
SFTPBP07988 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.85■□□□□ 0.13
SFTPBP07988 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.85■□□□□ 0.13
SFTPBP07988 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SFTPBP07988 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.85■□□□□ 0.13
SFTPBP07988 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SFTPBP07988 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.85■□□□□ 0.13
SFTPBP07988 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.84■□□□□ 0.13
SFTPBP07988 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 FITM1-202ENST00000559294 800 ntBASIC15.84■□□□□ 0.13
SFTPBP07988 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SFTPBP07988 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
SFTPBP07988 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SFTPBP07988 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.84■□□□□ 0.13
SFTPBP07988 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.84■□□□□ 0.13
SFTPBP07988 AC067852.2-201ENST00000590513 2313 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms