Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 AC011498.5-201ENST00000592027 486 ntBASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 CLEC4GP1-201ENST00000596555 870 ntBASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SNAP47Q5SQN1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SNAP47Q5SQN1 KRT8P32-201ENST00000512863 1461 ntBASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 MIR564-202ENST00000385049 94 ntBASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 BX276092.5-203ENST00000456199 560 ntBASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 AC012313.10-201ENST00000623509 926 ntBASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 AL391807.1-203ENST00000604392 2365 ntBASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.89■□□□□ 0.45
SNAP47Q5SQN1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 DUSP5P1-201ENST00000441325 1139 ntBASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 AC010240.3-201ENST00000607688 395 ntBASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAP47Q5SQN1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AL162741.1-201ENST00000565563 1558 ntBASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SNAP47Q5SQN1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms