RNA–Protein interactions for RNA: ENST00000518514.1

REPIN1-217, Transcript of replication initiator 1, humanhuman

TSL 3 BASIC

Gene REPIN1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REPIN1-217ENST00000518514 NISCHQ9Y2I1 1504 aa46.27■■■■■ 5
REPIN1-217ENST00000518514 ABCC9O60706 1549 aa42.96■■■■■ 4.47
REPIN1-217ENST00000518514 CCDC180Q9P1Z9 1646 aa41.99■■■■■ 4.31
REPIN1-217ENST00000518514 DNAJC5BQ9UF47 199 aa41.22■■■■■ 4.19
REPIN1-217ENST00000518514 RB1CC1Q8TDY2 1594 aa40.4■■■■■ 4.06
REPIN1-217ENST00000518514 NACADO15069 1562 aa39.86■■■■□ 3.97
REPIN1-217ENST00000518514 PABPN1Q86U42 306 aaKnown RBP eCLIP39.8■■■■□ 3.96
REPIN1-217ENST00000518514 UNC13AQ9UPW8 1703 aa39.73■■■■□ 3.95
REPIN1-217ENST00000518514 BICRAQ9NZM4 1560 aa39.39■■■■□ 3.9
REPIN1-217ENST00000518514 DCAF8L2P0C7V8 631 aa39.37■■■■□ 3.89
REPIN1-217ENST00000518514 MYO15BQ96JP2 1530 aa38.94■■■■□ 3.82
REPIN1-217ENST00000518514 CC2D2AQ9P2K1 1620 aa38.78■■■■□ 3.8
REPIN1-217ENST00000518514 CECR2Q9BXF3 1484 aa38.76■■■■□ 3.8
REPIN1-217ENST00000518514 SHROOM4Q9ULL8 1493 aa38.55■■■■□ 3.76
REPIN1-217ENST00000518514 DNAJC5Q9H3Z4 198 aa38.46■■■■□ 3.75
REPIN1-217ENST00000518514 EIF4G1Q04637 1599 aaKnown RBP38.43■■■■□ 3.74
REPIN1-217ENST00000518514 SCRIBQ14160 1630 aa38.24■■■■□ 3.71
REPIN1-217ENST00000518514 ZCCHC6Q5VYS8 1495 aaKnown RBP38.15■■■■□ 3.7
REPIN1-217ENST00000518514 DCAF1Q9Y4B6 1507 aa38.11■■■■□ 3.69
REPIN1-217ENST00000518514 CUX2O14529 1486 aa37.35■■■■□ 3.57
REPIN1-217ENST00000518514 ERCC6Q03468 1493 aa37.07■■■■□ 3.53
REPIN1-217ENST00000518514 NCAPD3P42695 1498 aa36.8■■■■□ 3.48
REPIN1-217ENST00000518514 NESP48681 1621 aa36.67■■■■□ 3.46
REPIN1-217ENST00000518514 ATAD2BQ9ULI0 1458 aa36.59■■■■□ 3.45
REPIN1-217ENST00000518514 THOC2Q8NI27 1593 aaKnown RBP36.52■■■■□ 3.44
REPIN1-217ENST00000518514 HMGXB3Q12766 1538 aa36.48■■■■□ 3.43
REPIN1-217ENST00000518514 SMARCA2P51531 1590 aa36.39■■■■□ 3.42
REPIN1-217ENST00000518514 TRIM41Q8WV44 630 aa36.38■■■■□ 3.41
REPIN1-217ENST00000518514 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
REPIN1-217ENST00000518514 KIF21AQ7Z4S6 1674 aa36.23■■■■□ 3.39
REPIN1-217ENST00000518514 LAMC3Q9Y6N6 1575 aa36.15■■■■□ 3.38
REPIN1-217ENST00000518514 BAZ1BQ9UIG0 1483 aaKnown RBP36.15■■■■□ 3.38
REPIN1-217ENST00000518514 PEG3Q9GZU2 1588 aa35.98■■■■□ 3.35
REPIN1-217ENST00000518514 BAZ1AQ9NRL2 1556 aaPredicted RBP35.94■■■■□ 3.34
REPIN1-217ENST00000518514 PDS5BQ9NTI5 1447 aa35.89■■■■□ 3.34
REPIN1-217ENST00000518514 MRC2Q9UBG0 1479 aa35.73■■■■□ 3.31
REPIN1-217ENST00000518514 WDR62O43379 1518 aa35.72■■■■□ 3.31
REPIN1-217ENST00000518514 MROH2BQ7Z745 1585 aa35.69■■■■□ 3.3
REPIN1-217ENST00000518514 CADPSQ9ULU8 1353 aa35.61■■■■□ 3.29
REPIN1-217ENST00000518514 OSCARQ8IYS5 282 aa35.4■■■■□ 3.26
REPIN1-217ENST00000518514 CEP164Q9UPV0 1460 aa35.37■■■■□ 3.25
REPIN1-217ENST00000518514 WIZO95785 1651 aa35.27■■■■□ 3.24
REPIN1-217ENST00000518514 RIMBP3CA6NJZ7 1639 aa35.26■■■■□ 3.24
REPIN1-217ENST00000518514 RIMBP3BA6NNM3 1639 aa35.26■■■■□ 3.24
REPIN1-217ENST00000518514 RIMBP3Q9UFD9 1639 aa35.26■■■■□ 3.24
REPIN1-217ENST00000518514 FANCD2Q9BXW9 1451 aa35.26■■■■□ 3.23
REPIN1-217ENST00000518514 URB2Q14146 1524 aaKnown RBP35.11■■■■□ 3.21
REPIN1-217ENST00000518514 CFTRP13569 1480 aa35.03■■■■□ 3.2
REPIN1-217ENST00000518514 ARHGEF11O15085 1522 aa34.99■■■■□ 3.19
REPIN1-217ENST00000518514 ZNF608Q9ULD9 1512 aaPredicted RBP34.84■■■■□ 3.17
REPIN1-217ENST00000518514 PRDM2Q13029 1718 aa34.76■■■■□ 3.16
REPIN1-217ENST00000518514 CYB5RLQ6IPT4 315 aa34.7■■■■□ 3.15
REPIN1-217ENST00000518514 IFT140Q96RY7 1462 aa34.68■■■■□ 3.14
REPIN1-217ENST00000518514 TOP2AP11388 1531 aaKnown RBP34.66■■■■□ 3.14
REPIN1-217ENST00000518514 EIF4G3O43432 1585 aaKnown RBP34.62■■■■□ 3.13
REPIN1-217ENST00000518514 CHD1O14646 1710 aa34.61■■■■□ 3.13
REPIN1-217ENST00000518514 ARAP1Q96P48 1450 aa34.59■■■■□ 3.13
REPIN1-217ENST00000518514 TRHP20396 242 aaPredicted RBP34.59■■■■□ 3.13
REPIN1-217ENST00000518514 RSF1Q96T23 1441 aaPredicted RBP34.53■■■■□ 3.12
REPIN1-217ENST00000518514 TOPBP1Q92547 1522 aa34.51■■■■□ 3.12
REPIN1-217ENST00000518514 AQRO60306 1485 aaKnown RBP eCLIP34.35■■■■□ 3.092e-10■■■■■ 52.5
REPIN1-217ENST00000518514 TARBP1Q13395 1621 aaKnown RBP34.35■■■■□ 3.09
REPIN1-217ENST00000518514 DNMBPQ6XZF7 1577 aa34.29■■■■□ 3.08
REPIN1-217ENST00000518514 CCDC88BA6NC98 1476 aa34.27■■■■□ 3.08
REPIN1-217ENST00000518514 AEBP2Q6ZN18 517 aaPredicted RBP34.27■■■■□ 3.08
REPIN1-217ENST00000518514 ABCC8Q09428 1581 aa34.23■■■■□ 3.07
REPIN1-217ENST00000518514 FBLN2P98095 1184 aa34.22■■■■□ 3.07
REPIN1-217ENST00000518514 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
REPIN1-217ENST00000518514 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
REPIN1-217ENST00000518514 RAD54L2Q9Y4B4 1467 aa34.01■■■■□ 3.04
REPIN1-217ENST00000518514 SNAPC4Q5SXM2 1469 aa33.97■■■■□ 3.03
REPIN1-217ENST00000518514 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
REPIN1-217ENST00000518514 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
REPIN1-217ENST00000518514 SOGA1O94964 1423 aa33.85■■■■□ 3.01
REPIN1-217ENST00000518514 WDR97A6NE52 1622 aa33.8■■■■□ 3
REPIN1-217ENST00000518514 MAGI1Q96QZ7 1491 aaPredicted RBP33.78■■■■□ 3
REPIN1-217ENST00000518514 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
REPIN1-217ENST00000518514 GAPVD1Q14C86 1478 aa33.75■■■□□ 2.99
REPIN1-217ENST00000518514 FGD5Q6ZNL6 1462 aa33.74■■■□□ 2.99
REPIN1-217ENST00000518514 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
REPIN1-217ENST00000518514 GRIN2BQ13224 1484 aa33.68■■■□□ 2.98
REPIN1-217ENST00000518514 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
REPIN1-217ENST00000518514 CUX1P39880 1505 aa33.59■■■□□ 2.97
REPIN1-217ENST00000518514 ERCC6L2Q5T890 1561 aa33.58■■■□□ 2.97
REPIN1-217ENST00000518514 KIF13AQ9H1H9 1805 aa33.46■■■□□ 2.95
REPIN1-217ENST00000518514 ABCA5Q8WWZ7 1642 aa33.4■■■□□ 2.94
REPIN1-217ENST00000518514 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
REPIN1-217ENST00000518514 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
REPIN1-217ENST00000518514 ABCA10Q8WWZ4 1543 aa33.27■■■□□ 2.92
REPIN1-217ENST00000518514 SHROOM2Q13796 1616 aa33.25■■■□□ 2.91
REPIN1-217ENST00000518514 ADAMTS12P58397 1594 aa33.21■■■□□ 2.91
REPIN1-217ENST00000518514 NUP160Q12769 1436 aa33.2■■■□□ 2.91
REPIN1-217ENST00000518514 ILDR1Q86SU0 546 aaPredicted RBP33.02■■■□□ 2.88
REPIN1-217ENST00000518514 KDM4FA0A1W2PPD8 638 aa33■■■□□ 2.87
REPIN1-217ENST00000518514 ABCC10Q5T3U5 1492 aa32.98■■■□□ 2.87
REPIN1-217ENST00000518514 DIP2BQ9P265 1576 aa32.95■■■□□ 2.86
REPIN1-217ENST00000518514 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
REPIN1-217ENST00000518514 PRG4Q92954 1404 aaPredicted RBP32.94■■■□□ 2.86
REPIN1-217ENST00000518514 FAM69CQ0P6D2 419 aa32.94■■■□□ 2.86
REPIN1-217ENST00000518514 KDM6BO15054 1643 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms