Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 PCDHB18P-201ENST00000524813 2368 ntBASIC16.13■□□□□ 0.17
SFTPBP07988 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
SFTPBP07988 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SFTPBP07988 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.13■□□□□ 0.17
SFTPBP07988 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SFTPBP07988 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.13■□□□□ 0.17
SFTPBP07988 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.13■□□□□ 0.17
SFTPBP07988 AC083906.6-201ENST00000641366 219 ntBASIC16.13■□□□□ 0.17
SFTPBP07988 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.13■□□□□ 0.17
SFTPBP07988 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.13■□□□□ 0.17
SFTPBP07988 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SFTPBP07988 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SFTPBP07988 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SFTPBP07988 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SFTPBP07988 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.12■□□□□ 0.17
SFTPBP07988 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.12■□□□□ 0.17
SFTPBP07988 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.12■□□□□ 0.17
SFTPBP07988 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.12■□□□□ 0.17
SFTPBP07988 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.12■□□□□ 0.17
SFTPBP07988 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.12■□□□□ 0.17
SFTPBP07988 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.12■□□□□ 0.17
SFTPBP07988 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.12■□□□□ 0.17
SFTPBP07988 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.12■□□□□ 0.17
SFTPBP07988 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
SFTPBP07988 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.12■□□□□ 0.17
SFTPBP07988 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SFTPBP07988 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.11■□□□□ 0.17
SFTPBP07988 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.11■□□□□ 0.17
SFTPBP07988 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 AP002982.1-201ENST00000492365 877 ntBASIC16.11■□□□□ 0.17
SFTPBP07988 Z85996.1-201ENST00000494644 937 ntBASIC16.11■□□□□ 0.17
SFTPBP07988 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.11■□□□□ 0.17
SFTPBP07988 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.11■□□□□ 0.17
SFTPBP07988 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.11■□□□□ 0.17
SFTPBP07988 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SFTPBP07988 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SFTPBP07988 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.11■□□□□ 0.17
SFTPBP07988 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SFTPBP07988 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SFTPBP07988 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms