Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
THSD1Q9NS62 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THSD1Q9NS62 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
THSD1Q9NS62 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
THSD1Q9NS62 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.06■□□□□ 0.48
THSD1Q9NS62 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 AC141586.3-201ENST00000562166 1838 ntBASIC18.05■□□□□ 0.48
THSD1Q9NS62 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 SPDYE13P-201ENST00000445314 798 ntBASIC18.05■□□□□ 0.48
THSD1Q9NS62 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
THSD1Q9NS62 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.05■□□□□ 0.48
THSD1Q9NS62 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 RASA4DP-201ENST00000460726 1199 ntBASIC18.04■□□□□ 0.48
THSD1Q9NS62 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
THSD1Q9NS62 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.04■□□□□ 0.48
THSD1Q9NS62 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 AL845331.1-201ENST00000424978 1190 ntBASIC18.03■□□□□ 0.48
THSD1Q9NS62 FDX1P1-201ENST00000449115 551 ntBASIC18.03■□□□□ 0.48
THSD1Q9NS62 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 AC011498.5-201ENST00000592027 486 ntBASIC18.03■□□□□ 0.48
THSD1Q9NS62 CR769767.2-201ENST00000622735 460 ntBASIC18.03■□□□□ 0.48
THSD1Q9NS62 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
THSD1Q9NS62 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
THSD1Q9NS62 TEX21P-204ENST00000641479 1693 ntBASIC18.03■□□□□ 0.48
THSD1Q9NS62 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.02■□□□□ 0.48
THSD1Q9NS62 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
THSD1Q9NS62 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.02■□□□□ 0.48
THSD1Q9NS62 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
THSD1Q9NS62 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms