Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRGV1A0A0A0MS02 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 KRT8P3-201ENST00000519669 1449 ntBASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 AC097488.1-201ENST00000507834 756 ntBASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 DGCR10-201ENST00000609839 495 ntBASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRGV1A0A0A0MS02 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 HEIH-201ENST00000623091 1652 ntBASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 MFAP1P1-201ENST00000442257 1255 ntBASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 Z99916.2-201ENST00000604037 246 ntBASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRGV1A0A0A0MS02 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV1A0A0A0MS02 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV1A0A0A0MS02 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV1A0A0A0MS02 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRGV1A0A0A0MS02 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms