Protein–RNA interactions for Protein: Q9UKI3

VPREB3, Pre-B lymphocyte protein 3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3Q9UKI3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPREB3Q9UKI3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.87□□□□□ -0.03
VPREB3Q9UKI3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPREB3Q9UKI3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
VPREB3Q9UKI3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VPREB3Q9UKI3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 AC011498.5-201ENST00000592027 486 ntBASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VPREB3Q9UKI3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 ATP5G2P1-201ENST00000433580 426 ntBASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 HLA-F-220ENST00000434407 884 ntBASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 MIR3180-4-201ENST00000582223 153 ntBASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 AL121672.3-201ENST00000608644 468 ntBASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 AL162741.1-201ENST00000565563 1558 ntBASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
VPREB3Q9UKI3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 AL391807.1-203ENST00000604392 2365 ntBASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 AL032819.2-201ENST00000624543 2162 ntBASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 BX276092.5-203ENST00000456199 560 ntBASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VPREB3Q9UKI3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms