Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CDH20Q9HBT6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 CYP2D8P-201ENST00000433633 1490 ntBASIC16.37■□□□□ 0.21
CDH20Q9HBT6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 TSPY14P-201ENST00000303979 915 ntBASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 AC010947.1-201ENST00000623454 693 ntBASIC16.37■□□□□ 0.21
CDH20Q9HBT6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDH20Q9HBT6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 AL049812.1-201ENST00000432563 2267 ntBASIC16.36■□□□□ 0.21
CDH20Q9HBT6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CDH20Q9HBT6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 KRT18P22-201ENST00000402024 1347 ntBASIC16.35■□□□□ 0.21
CDH20Q9HBT6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms