Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SPCS1Q9Y6A9 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPCS1Q9Y6A9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SPCS1Q9Y6A9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SPCS1Q9Y6A9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPCS1Q9Y6A9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SPCS1Q9Y6A9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPCS1Q9Y6A9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
SPCS1Q9Y6A9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SPCS1Q9Y6A9 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPCS1Q9Y6A9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPCS1Q9Y6A9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPCS1Q9Y6A9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SPCS1Q9Y6A9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SPCS1Q9Y6A9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SPCS1Q9Y6A9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPCS1Q9Y6A9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPCS1Q9Y6A9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPCS1Q9Y6A9 AL139393.2-201ENST00000608721 2025 ntBASIC17.4■□□□□ 0.38
SPCS1Q9Y6A9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.39■□□□□ 0.38
SPCS1Q9Y6A9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SPCS1Q9Y6A9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPCS1Q9Y6A9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS1Q9Y6A9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS1Q9Y6A9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPCS1Q9Y6A9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPCS1Q9Y6A9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SPCS1Q9Y6A9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPCS1Q9Y6A9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS1Q9Y6A9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS1Q9Y6A9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS1Q9Y6A9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPCS1Q9Y6A9 AC145676.1-201ENST00000514988 2004 ntBASIC17.33■□□□□ 0.37
SPCS1Q9Y6A9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SPCS1Q9Y6A9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS1Q9Y6A9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS1Q9Y6A9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS1Q9Y6A9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.33■□□□□ 0.36
SPCS1Q9Y6A9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS1Q9Y6A9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPCS1Q9Y6A9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SPCS1Q9Y6A9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SPCS1Q9Y6A9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS1Q9Y6A9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SPCS1Q9Y6A9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPCS1Q9Y6A9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPCS1Q9Y6A9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SPCS1Q9Y6A9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS1Q9Y6A9 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPCS1Q9Y6A9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS1Q9Y6A9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SPCS1Q9Y6A9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS1Q9Y6A9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS1Q9Y6A9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SPCS1Q9Y6A9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SPCS1Q9Y6A9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.28■□□□□ 0.36
SPCS1Q9Y6A9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.28■□□□□ 0.36
SPCS1Q9Y6A9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS1Q9Y6A9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS1Q9Y6A9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS1Q9Y6A9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SPCS1Q9Y6A9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPCS1Q9Y6A9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms