Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 CKB1YGL019W 837 nt7.56□□□□□ -1.2
HRD3Q05787 OPI1YHL020C 1215 nt7.55□□□□□ -1.2
HRD3Q05787 URA1YKL216W 945 nt7.55□□□□□ -1.2
HRD3Q05787 PET10YKR046C 852 nt7.55□□□□□ -1.2
HRD3Q05787 VPS65YLR322W 315 nt7.55□□□□□ -1.2
HRD3Q05787 CST26YBR042C 1194 nt7.55□□□□□ -1.2
HRD3Q05787 BDS1YOL164W 1941 nt7.54□□□□□ -1.2
HRD3Q05787 TRR2YHR106W 1029 nt7.53□□□□□ -1.2
HRD3Q05787 MET13YGL125W 1803 nt7.52□□□□□ -1.2
HRD3Q05787 MAS1YLR163C 1389 nt7.51□□□□□ -1.21
HRD3Q05787 YML122CYML122C 381 nt7.51□□□□□ -1.21
HRD3Q05787 PRS4YBL068W 981 nt7.51□□□□□ -1.21
HRD3Q05787 RCF2YNR018W 675 nt7.51□□□□□ -1.21
HRD3Q05787 CAR2YLR438W 1275 nt7.5□□□□□ -1.21
HRD3Q05787 AIM46YHR199C 933 nt7.49□□□□□ -1.21
HRD3Q05787 LEO1YOR123C 1395 nt7.48□□□□□ -1.21
HRD3Q05787 PDC5YLR134W 1692 nt7.48□□□□□ -1.21
HRD3Q05787 YJL144WYJL144W 315 nt7.47□□□□□ -1.21
HRD3Q05787 CCW12YLR110C 402 nt7.47□□□□□ -1.21
HRD3Q05787 PDA1YER178W 1263 nt7.46□□□□□ -1.22
HRD3Q05787 YJL213WYJL213W 996 nt7.46□□□□□ -1.22
HRD3Q05787 ZIM17YNL310C 525 nt7.46□□□□□ -1.22
HRD3Q05787 MCP1YOR228C 909 nt7.46□□□□□ -1.22
HRD3Q05787 PAM17YKR065C 594 nt7.45□□□□□ -1.22
HRD3Q05787 ARO7YPR060C 771 nt7.45□□□□□ -1.22
HRD3Q05787 FIT1YDR534C 1587 nt7.45□□□□□ -1.22
HRD3Q05787 DUS3YLR401C 2007 nt7.44□□□□□ -1.22
HRD3Q05787 ADE16YLR028C 1776 nt7.44□□□□□ -1.22
HRD3Q05787 SNA3YJL151C 402 nt7.44□□□□□ -1.22
HRD3Q05787 snR30snR30 606 nt7.44□□□□□ -1.22
HRD3Q05787 YER152CYER152C 1332 nt7.44□□□□□ -1.22
HRD3Q05787 SNF7YLR025W 723 nt7.43□□□□□ -1.22
HRD3Q05787 DCR2YLR361C 1737 nt7.43□□□□□ -1.22
HRD3Q05787 DML1YMR211W 1428 nt7.43□□□□□ -1.22
HRD3Q05787 NAF1YNL124W 1479 nt7.43□□□□□ -1.22
HRD3Q05787 NFS1YCL017C 1494 nt7.43□□□□□ -1.22
HRD3Q05787 RSC9YML127W 1746 nt7.42□□□□□ -1.22
HRD3Q05787 YAH1YPL252C 519 nt7.42□□□□□ -1.22
HRD3Q05787 RUP1YOR138C 2016 nt7.41□□□□□ -1.22
HRD3Q05787 YEL009C-AYEL009C-A 408 nt7.41□□□□□ -1.22
HRD3Q05787 PUS4YNL292W 1212 nt7.41□□□□□ -1.22
HRD3Q05787 MDH2YOL126C 1134 nt7.41□□□□□ -1.22
HRD3Q05787 YPQ2YDR352W 954 nt7.4□□□□□ -1.22
HRD3Q05787 UFD1YGR048W 1086 nt7.4□□□□□ -1.22
HRD3Q05787 LGE1YPL055C 999 nt7.4□□□□□ -1.22
HRD3Q05787 SPE3YPR069C 882 nt7.4□□□□□ -1.22
HRD3Q05787 CIT2YCR005C 1383 nt7.4□□□□□ -1.22
HRD3Q05787 PMT7YDR307W 1989 nt7.39□□□□□ -1.23
HRD3Q05787 SGF73YGL066W 1974 nt7.38□□□□□ -1.23
HRD3Q05787 HNM1YGL077C 1692 nt7.38□□□□□ -1.23
HRD3Q05787 GNP1YDR508C 1992 nt7.37□□□□□ -1.23
HRD3Q05787 AAD14YNL331C 1131 nt7.37□□□□□ -1.23
HRD3Q05787 YPL041CYPL041C 624 nt7.37□□□□□ -1.23
HRD3Q05787 YPR130CYPR130C 408 nt7.37□□□□□ -1.23
HRD3Q05787 DPM1YPR183W 804 nt7.37□□□□□ -1.23
HRD3Q05787 NAS6YGR232W 687 nt7.36□□□□□ -1.23
HRD3Q05787 SML1YML058W 315 nt7.36□□□□□ -1.23
HRD3Q05787 RTC4YNL254C 1206 nt7.36□□□□□ -1.23
HRD3Q05787 AFG3YER017C 2286 nt7.36□□□□□ -1.23
HRD3Q05787 YBL113CYBL113C 2379 nt7.35□□□□□ -1.23
HRD3Q05787 TUB1YML085C 1344 nt7.35□□□□□ -1.23
HRD3Q05787 ERG24YNL280C 1317 nt7.35□□□□□ -1.23
HRD3Q05787 TPI1YDR050C 747 nt7.35□□□□□ -1.23
HRD3Q05787 YEL034C-AYEL034C-A 603 nt7.35□□□□□ -1.23
HRD3Q05787 YLR162WYLR162W 357 nt7.35□□□□□ -1.23
HRD3Q05787 RTC2YBR147W 891 nt7.35□□□□□ -1.23
HRD3Q05787 PUS7YOR243C 2031 nt7.35□□□□□ -1.23
HRD3Q05787 YDR306CYDR306C 1437 nt7.35□□□□□ -1.23
HRD3Q05787 ALR1YOL130W 2580 nt7.34□□□□□ -1.23
HRD3Q05787 PET117YER058W 324 nt7.34□□□□□ -1.23
HRD3Q05787 YCL049CYCL049C 939 nt7.34□□□□□ -1.23
HRD3Q05787 MPH3YJR160C 1809 nt7.34□□□□□ -1.24
HRD3Q05787 PLB3YOL011W 2061 nt7.33□□□□□ -1.24
HRD3Q05787 COG1YGL223C 1254 nt7.33□□□□□ -1.24
HRD3Q05787 YOR111WYOR111W 699 nt7.33□□□□□ -1.24
HRD3Q05787 HSV2YGR223C 1347 nt7.32□□□□□ -1.24
HRD3Q05787 GET4YOR164C 939 nt7.32□□□□□ -1.24
HRD3Q05787 BIO3YNR058W 1443 nt7.32□□□□□ -1.24
HRD3Q05787 TCB1YOR086C 3561 nt7.32□□□□□ -1.24
HRD3Q05787 PFS2YNL317W 1398 nt7.32□□□□□ -1.24
HRD3Q05787 YLR173WYLR173W 1827 nt7.31□□□□□ -1.24
HRD3Q05787 TOP3YLR234W 1971 nt7.31□□□□□ -1.24
HRD3Q05787 MPE1YKL059C 1326 nt7.31□□□□□ -1.24
HRD3Q05787 CIA1YDR267C 993 nt7.31□□□□□ -1.24
HRD3Q05787 ERG10YPL028W 1197 nt7.31□□□□□ -1.24
HRD3Q05787 YDR327WYDR327W 327 nt7.3□□□□□ -1.24
HRD3Q05787 DMC1YER179W 1005 nt7.3□□□□□ -1.24
HRD3Q05787 LDB7YBL006C 543 nt7.3□□□□□ -1.24
HRD3Q05787 LPD1YFL018C 1500 nt7.3□□□□□ -1.24
HRD3Q05787 RDR1YOR380W 1641 nt7.3□□□□□ -1.24
HRD3Q05787 SUF3tG(CCC)D 72 nt7.29□□□□□ -1.24
HRD3Q05787 PLB2YMR006C 2121 nt7.29□□□□□ -1.24
HRD3Q05787 YGL260WYGL260W 231 nt7.28□□□□□ -1.24
HRD3Q05787 TOM71YHR117W 1920 nt7.27□□□□□ -1.25
HRD3Q05787 YMR074CYMR074C 438 nt7.27□□□□□ -1.25
HRD3Q05787 ERR3YMR323W 1314 nt7.27□□□□□ -1.25
HRD3Q05787 URH1YDR400W 1023 nt7.26□□□□□ -1.25
HRD3Q05787 YKL147CYKL147C 618 nt7.26□□□□□ -1.25
HRD3Q05787 NSG2YNL156C 900 nt7.26□□□□□ -1.25
HRD3Q05787 YNR001W-AYNR001W-A 219 nt7.26□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms