Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 FCY1YPR062W 477 nt6.73□□□□□ -1.33
SSN8P47821 WSC3YOL105C 1671 nt6.73□□□□□ -1.33
SSN8P47821 MLS1YNL117W 1665 nt6.72□□□□□ -1.33
SSN8P47821 MAL31YBR298C 1845 nt6.72□□□□□ -1.33
SSN8P47821 GRH1YDR517W 1119 nt6.72□□□□□ -1.33
SSN8P47821 YPT31YER031C 672 nt6.72□□□□□ -1.33
SSN8P47821 RRN10YBL025W 438 nt6.72□□□□□ -1.33
SSN8P47821 CBK1YNL161W 2271 nt6.72□□□□□ -1.33
SSN8P47821 SWM1YDR260C 513 nt6.71□□□□□ -1.34
SSN8P47821 YHL030W-AYHL030W-A 462 nt6.71□□□□□ -1.34
SSN8P47821 SLG1YOR008C 1137 nt6.71□□□□□ -1.34
SSN8P47821 EFM1YHL039W 1758 nt6.71□□□□□ -1.34
SSN8P47821 KIN1YDR122W 3195 nt6.71□□□□□ -1.34
SSN8P47821 PDC5YLR134W 1692 nt6.71□□□□□ -1.34
SSN8P47821 RUP1YOR138C 2016 nt6.71□□□□□ -1.34
SSN8P47821 AIM3YBR108W 2844 nt6.7□□□□□ -1.34
SSN8P47821 MRP7YNL005C 1116 nt6.7□□□□□ -1.34
SSN8P47821 CYC8YBR112C 2901 nt6.7□□□□□ -1.34
SSN8P47821 SHC1YER096W 1539 nt6.7□□□□□ -1.34
SSN8P47821 RGT2YDL138W 2292 nt6.69□□□□□ -1.34
SSN8P47821 BRN1YBL097W 2265 nt6.68□□□□□ -1.34
SSN8P47821 ARO3YDR035W 1113 nt6.68□□□□□ -1.34
SSN8P47821 ALG7YBR243C 1347 nt6.68□□□□□ -1.34
SSN8P47821 HXT8YJL214W 1710 nt6.67□□□□□ -1.34
SSN8P47821 FPR2YDR519W 408 nt6.67□□□□□ -1.34
SSN8P47821 YMR007WYMR007W 381 nt6.67□□□□□ -1.34
SSN8P47821 SMK1YPR054W 1167 nt6.67□□□□□ -1.34
SSN8P47821 YHR131CYHR131C 2553 nt6.67□□□□□ -1.34
SSN8P47821 GPA1YHR005C 1419 nt6.67□□□□□ -1.34
SSN8P47821 SLX5YDL013W 1860 nt6.66□□□□□ -1.34
SSN8P47821 PRE10YOR362C 867 nt6.66□□□□□ -1.34
SSN8P47821 PEX28YHR150W 1740 nt6.66□□□□□ -1.34
SSN8P47821 YER152W-AYER152W-A 567 nt6.65□□□□□ -1.34
SSN8P47821 YJL160CYJL160C 864 nt6.65□□□□□ -1.34
SSN8P47821 TIM50YPL063W 1431 nt6.65□□□□□ -1.35
SSN8P47821 GLN3YER040W 2193 nt6.65□□□□□ -1.35
SSN8P47821 PET18YCR020C 648 nt6.64□□□□□ -1.35
SSN8P47821 GTT3YEL017W 1014 nt6.64□□□□□ -1.35
SSN8P47821 HHY1YEL059W 309 nt6.64□□□□□ -1.35
SSN8P47821 GNA1YFL017C 480 nt6.64□□□□□ -1.35
SSN8P47821 CKB1YGL019W 837 nt6.64□□□□□ -1.35
SSN8P47821 YMR206WYMR206W 942 nt6.64□□□□□ -1.35
SSN8P47821 BXI1YNL305C 894 nt6.64□□□□□ -1.35
SSN8P47821 RCR1YBR005W 642 nt6.64□□□□□ -1.35
SSN8P47821 POP1YNL221C 2628 nt6.64□□□□□ -1.35
SSN8P47821 YPR084WYPR084W 1371 nt6.64□□□□□ -1.35
SSN8P47821 AVT4YNL101W 2142 nt6.64□□□□□ -1.35
SSN8P47821 YER156CYER156C 1017 nt6.63□□□□□ -1.35
SSN8P47821 HXK2YGL253W 1461 nt6.63□□□□□ -1.35
SSN8P47821 SNP1YIL061C 903 nt6.62□□□□□ -1.35
SSN8P47821 PMU1YKL128C 888 nt6.62□□□□□ -1.35
SSN8P47821 DPH5YLR172C 903 nt6.62□□□□□ -1.35
SSN8P47821 RPS6AYPL090C 711 nt6.62□□□□□ -1.35
SSN8P47821 RPS6BYBR181C 711 nt6.62□□□□□ -1.35
SSN8P47821 AVL9YLR114C 2295 nt6.62□□□□□ -1.35
SSN8P47821 EFT2YDR385W 2529 nt6.61□□□□□ -1.35
SSN8P47821 EFT1YOR133W 2529 nt6.61□□□□□ -1.35
SSN8P47821 NMT1YLR195C 1368 nt6.61□□□□□ -1.35
SSN8P47821 YOR041CYOR041C 432 nt6.61□□□□□ -1.35
SSN8P47821 JHD1YER051W 1479 nt6.6□□□□□ -1.35
SSN8P47821 YNL200CYNL200C 741 nt6.6□□□□□ -1.35
SSN8P47821 BIM1YER016W 1035 nt6.59□□□□□ -1.35
SSN8P47821 MFT1YML062C 1179 nt6.59□□□□□ -1.35
SSN8P47821 ARG7YMR062C 1326 nt6.58□□□□□ -1.36
SSN8P47821 YGR127WYGR127W 939 nt6.58□□□□□ -1.36
SSN8P47821 ELP6YMR312W 822 nt6.58□□□□□ -1.36
SSN8P47821 ATP2YJR121W 1536 nt6.58□□□□□ -1.36
SSN8P47821 LAG2YOL025W 1983 nt6.58□□□□□ -1.36
SSN8P47821 FCY22YER060W-A 1593 nt6.57□□□□□ -1.36
SSN8P47821 MTC6YHR151C 1581 nt6.57□□□□□ -1.36
SSN8P47821 PAC10YGR078C 600 nt6.57□□□□□ -1.36
SSN8P47821 CDA1YLR307W 906 nt6.57□□□□□ -1.36
SSN8P47821 CDC23YHR166C 1881 nt6.57□□□□□ -1.36
SSN8P47821 PET494YNR045W 1470 nt6.56□□□□□ -1.36
SSN8P47821 SNA3YJL151C 402 nt6.56□□□□□ -1.36
SSN8P47821 TES1YJR019C 1050 nt6.56□□□□□ -1.36
SSN8P47821 MNN9YPL050C 1188 nt6.56□□□□□ -1.36
SSN8P47821 YBL113CYBL113C 2379 nt6.55□□□□□ -1.36
SSN8P47821 ENB1YOL158C 1821 nt6.55□□□□□ -1.36
SSN8P47821 THI4YGR144W 981 nt6.55□□□□□ -1.36
SSN8P47821 HRA1HRA1 564 nt6.55□□□□□ -1.36
SSN8P47821 GYP8YFL027C 1494 nt6.54□□□□□ -1.36
SSN8P47821 YOR012WYOR012W 414 nt6.54□□□□□ -1.36
SSN8P47821 UBP13YBL067C 2244 nt6.54□□□□□ -1.36
SSN8P47821 CEF1YMR213W 1773 nt6.54□□□□□ -1.36
SSN8P47821 HAL5YJL165C 2568 nt6.54□□□□□ -1.36
SSN8P47821 ACS1YAL054C 2142 nt6.53□□□□□ -1.36
SSN8P47821 snR82snR82 268 nt6.53□□□□□ -1.36
SSN8P47821 UTR5YEL035C 501 nt6.53□□□□□ -1.36
SSN8P47821 GTS1YGL181W 1191 nt6.53□□□□□ -1.36
SSN8P47821 FLC2YAL053W 2352 nt6.53□□□□□ -1.36
SSN8P47821 AOS1YPR180W 1044 nt6.52□□□□□ -1.37
SSN8P47821 DST1YGL043W 930 nt6.51□□□□□ -1.37
SSN8P47821 YIA6YIL006W 1122 nt6.51□□□□□ -1.37
SSN8P47821 HAM1YJR069C 594 nt6.51□□□□□ -1.37
SSN8P47821 TCB1YOR086C 3561 nt6.51□□□□□ -1.37
SSN8P47821 FET4YMR319C 1659 nt6.51□□□□□ -1.37
SSN8P47821 DCR2YLR361C 1737 nt6.5□□□□□ -1.37
SSN8P47821 PXL1YKR090W 2121 nt6.5□□□□□ -1.37
SSN8P47821 YIL168WYIL168W 384 nt6.5□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 52.6 ms