Protein–RNA interactions for Protein: P39538

UBP12, Ubiquitin carboxyl-terminal hydrolase 12, yeastyeast

Predictions only

Length 1,254 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP12P39538 PTH2YBL057C 627 nt8.9□□□□□ -0.98
UBP12P39538 YPL067CYPL067C 597 nt8.9□□□□□ -0.98
UBP12P39538 YOR072WYOR072W 315 nt8.89□□□□□ -0.99
UBP12P39538 MBF1YOR298C-A 456 nt8.89□□□□□ -0.99
UBP12P39538 YRF1-3YGR296W 5580 nt8.88□□□□□ -0.99
UBP12P39538 YRF1-6YNL339C 5580 nt8.88□□□□□ -0.99
UBP12P39538 YRF1-7YPL283C 5580 nt8.88□□□□□ -0.99
UBP12P39538 YLR173WYLR173W 1827 nt8.88□□□□□ -0.99
UBP12P39538 PMT1YDL095W 2454 nt8.88□□□□□ -0.99
UBP12P39538 URA1YKL216W 945 nt8.87□□□□□ -0.99
UBP12P39538 DIA4YHR011W 1341 nt8.86□□□□□ -0.99
UBP12P39538 ATG22YCL038C 1587 nt8.86□□□□□ -0.99
UBP12P39538 PEX28YHR150W 1740 nt8.85□□□□□ -0.99
UBP12P39538 RPL2AYFR031C-A 765 nt8.85□□□□□ -0.99
UBP12P39538 PIL1YGR086C 1020 nt8.85□□□□□ -0.99
UBP12P39538 TRR2YHR106W 1029 nt8.85□□□□□ -0.99
UBP12P39538 VPS65YLR322W 315 nt8.85□□□□□ -0.99
UBP12P39538 BDS1YOL164W 1941 nt8.85□□□□□ -0.99
UBP12P39538 YDR215CYDR215C 414 nt8.84□□□□□ -0.99
UBP12P39538 CKB1YGL019W 837 nt8.84□□□□□ -0.99
UBP12P39538 OPI1YHL020C 1215 nt8.83□□□□□ -1
UBP12P39538 PET10YKR046C 852 nt8.83□□□□□ -1
UBP12P39538 CST26YBR042C 1194 nt8.83□□□□□ -1
UBP12P39538 MEX67YPL169C 1800 nt8.82□□□□□ -1
UBP12P39538 YML122CYML122C 381 nt8.81□□□□□ -1
UBP12P39538 MET13YGL125W 1803 nt8.8□□□□□ -1
UBP12P39538 PRS4YBL068W 981 nt8.8□□□□□ -1
UBP12P39538 RCF2YNR018W 675 nt8.8□□□□□ -1
UBP12P39538 YTH1YPR107C 627 nt8.8□□□□□ -1
UBP12P39538 AIM46YHR199C 933 nt8.79□□□□□ -1
UBP12P39538 IDP3YNL009W 1263 nt8.79□□□□□ -1
UBP12P39538 LEO1YOR123C 1395 nt8.78□□□□□ -1
UBP12P39538 RMA1YKL132C 1293 nt8.78□□□□□ -1
UBP12P39538 CAR2YLR438W 1275 nt8.78□□□□□ -1
UBP12P39538 ZIM17YNL310C 525 nt8.78□□□□□ -1
UBP12P39538 MCP1YOR228C 909 nt8.78□□□□□ -1
UBP12P39538 RTG2YGL252C 1767 nt8.78□□□□□ -1
UBP12P39538 UBP13YBL067C 2244 nt8.77□□□□□ -1.01
UBP12P39538 PDA1YER178W 1263 nt8.77□□□□□ -1.01
UBP12P39538 CCW12YLR110C 402 nt8.76□□□□□ -1.01
UBP12P39538 PDC5YLR134W 1692 nt8.75□□□□□ -1.01
UBP12P39538 YJL144WYJL144W 315 nt8.75□□□□□ -1.01
UBP12P39538 SNA3YJL151C 402 nt8.75□□□□□ -1.01
UBP12P39538 FIT1YDR534C 1587 nt8.74□□□□□ -1.01
UBP12P39538 YIL177CYIL177C 5277 nt8.74□□□□□ -1.01
UBP12P39538 PAM17YKR065C 594 nt8.74□□□□□ -1.01
UBP12P39538 NFS1YCL017C 1494 nt8.74□□□□□ -1.01
UBP12P39538 YKR023WYKR023W 1593 nt8.73□□□□□ -1.01
UBP12P39538 PUS5YLR165C 765 nt8.72□□□□□ -1.01
UBP12P39538 ALR1YOL130W 2580 nt8.72□□□□□ -1.01
UBP12P39538 YER152CYER152C 1332 nt8.72□□□□□ -1.01
UBP12P39538 DCR2YLR361C 1737 nt8.71□□□□□ -1.01
UBP12P39538 DUS3YLR401C 2007 nt8.71□□□□□ -1.01
UBP12P39538 YJL213WYJL213W 996 nt8.71□□□□□ -1.02
UBP12P39538 LGE1YPL055C 999 nt8.71□□□□□ -1.02
UBP12P39538 snR30snR30 606 nt8.71□□□□□ -1.02
UBP12P39538 DML1YMR211W 1428 nt8.71□□□□□ -1.02
UBP12P39538 GCD11YER025W 1584 nt8.7□□□□□ -1.02
UBP12P39538 FHN1YGR131W 525 nt8.7□□□□□ -1.02
UBP12P39538 PUS4YNL292W 1212 nt8.7□□□□□ -1.02
UBP12P39538 SPE3YPR069C 882 nt8.7□□□□□ -1.02
UBP12P39538 RSC9YML127W 1746 nt8.7□□□□□ -1.02
UBP12P39538 ADE16YLR028C 1776 nt8.69□□□□□ -1.02
UBP12P39538 MDH2YOL126C 1134 nt8.68□□□□□ -1.02
UBP12P39538 YAH1YPL252C 519 nt8.68□□□□□ -1.02
UBP12P39538 YPR130CYPR130C 408 nt8.68□□□□□ -1.02
UBP12P39538 NAF1YNL124W 1479 nt8.68□□□□□ -1.02
UBP12P39538 YEL009C-AYEL009C-A 408 nt8.67□□□□□ -1.02
UBP12P39538 KDX1YKL161C 1302 nt8.67□□□□□ -1.02
UBP12P39538 RUP1YOR138C 2016 nt8.66□□□□□ -1.02
UBP12P39538 SNU66YOR308C 1764 nt8.66□□□□□ -1.02
UBP12P39538 SNF7YLR025W 723 nt8.66□□□□□ -1.02
UBP12P39538 YLR162WYLR162W 357 nt8.66□□□□□ -1.02
UBP12P39538 DPM1YPR183W 804 nt8.66□□□□□ -1.02
UBP12P39538 ADE2YOR128C 1716 nt8.66□□□□□ -1.02
UBP12P39538 CIT2YCR005C 1383 nt8.65□□□□□ -1.02
UBP12P39538 PMT7YDR307W 1989 nt8.65□□□□□ -1.02
UBP12P39538 HNM1YGL077C 1692 nt8.65□□□□□ -1.03
UBP12P39538 YBL113CYBL113C 2379 nt8.64□□□□□ -1.03
UBP12P39538 YPQ2YDR352W 954 nt8.64□□□□□ -1.03
UBP12P39538 URH1YDR400W 1023 nt8.64□□□□□ -1.03
UBP12P39538 SML1YML058W 315 nt8.64□□□□□ -1.03
UBP12P39538 SGF73YGL066W 1974 nt8.64□□□□□ -1.03
UBP12P39538 AAD14YNL331C 1131 nt8.63□□□□□ -1.03
UBP12P39538 TUB1YML085C 1344 nt8.62□□□□□ -1.03
UBP12P39538 AFG3YER017C 2286 nt8.61□□□□□ -1.03
UBP12P39538 RTC4YNL254C 1206 nt8.61□□□□□ -1.03
UBP12P39538 YOR111WYOR111W 699 nt8.61□□□□□ -1.03
UBP12P39538 PLB3YOL011W 2061 nt8.61□□□□□ -1.03
UBP12P39538 BIO3YNR058W 1443 nt8.61□□□□□ -1.03
UBP12P39538 MPH3YJR160C 1809 nt8.61□□□□□ -1.03
UBP12P39538 ERG24YNL280C 1317 nt8.6□□□□□ -1.03
UBP12P39538 TPI1YDR050C 747 nt8.6□□□□□ -1.03
UBP12P39538 PET117YER058W 324 nt8.6□□□□□ -1.03
UBP12P39538 GET4YOR164C 939 nt8.6□□□□□ -1.03
UBP12P39538 YCL049CYCL049C 939 nt8.6□□□□□ -1.03
UBP12P39538 YJL045WYJL045W 1905 nt8.6□□□□□ -1.03
UBP12P39538 MDL2YPL270W 2322 nt8.59□□□□□ -1.03
UBP12P39538 RTC2YBR147W 891 nt8.59□□□□□ -1.03
UBP12P39538 TOP3YLR234W 1971 nt8.58□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms