Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PRAF2O60831 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRAF2O60831 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAF2O60831 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC21.27■■□□□ 1
PRAF2O60831 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.27■■□□□ 1
PRAF2O60831 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAF2O60831 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PRAF2O60831 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.27■□□□□ 0.99
PRAF2O60831 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAF2O60831 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAF2O60831 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAF2O60831 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAF2O60831 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PRAF2O60831 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAF2O60831 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAF2O60831 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAF2O60831 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAF2O60831 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAF2O60831 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAF2O60831 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAF2O60831 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.23■□□□□ 0.99
PRAF2O60831 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAF2O60831 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAF2O60831 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRAF2O60831 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAF2O60831 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAF2O60831 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAF2O60831 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.2■□□□□ 0.98
PRAF2O60831 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAF2O60831 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PRAF2O60831 AC092803.2-201ENST00000564287 1899 ntBASIC21.2■□□□□ 0.98
PRAF2O60831 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PRAF2O60831 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAF2O60831 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAF2O60831 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAF2O60831 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAF2O60831 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAF2O60831 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PRAF2O60831 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.17■□□□□ 0.98
PRAF2O60831 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PRAF2O60831 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAF2O60831 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PRAF2O60831 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAF2O60831 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAF2O60831 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAF2O60831 WASH5P-204ENST00000632292 975 ntBASIC21.16■□□□□ 0.98
PRAF2O60831 AP002414.2-202ENST00000590929 1450 ntBASIC21.15■□□□□ 0.98
PRAF2O60831 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PRAF2O60831 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRAF2O60831 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAF2O60831 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PRAF2O60831 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.13■□□□□ 0.97
PRAF2O60831 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAF2O60831 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAF2O60831 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAF2O60831 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PRAF2O60831 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
PRAF2O60831 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.12■□□□□ 0.97
PRAF2O60831 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAF2O60831 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAF2O60831 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PRAF2O60831 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAF2O60831 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.1■□□□□ 0.97
PRAF2O60831 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PRAF2O60831 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRAF2O60831 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRAF2O60831 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRAF2O60831 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
PRAF2O60831 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRAF2O60831 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PRAF2O60831 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.09■□□□□ 0.97
PRAF2O60831 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAF2O60831 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAF2O60831 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRAF2O60831 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAF2O60831 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRAF2O60831 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRAF2O60831 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRAF2O60831 AC100797.4-201ENST00000631653 1827 ntBASIC21.08■□□□□ 0.96
PRAF2O60831 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRAF2O60831 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAF2O60831 ERN1-208ENST00000606895 2068 ntBASIC21.07■□□□□ 0.96
PRAF2O60831 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.07■□□□□ 0.96
PRAF2O60831 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRAF2O60831 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PRAF2O60831 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAF2O60831 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAF2O60831 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAF2O60831 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.06■□□□□ 0.96
PRAF2O60831 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRAF2O60831 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAF2O60831 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRAF2O60831 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.05■□□□□ 0.96
PRAF2O60831 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAF2O60831 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PRAF2O60831 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAF2O60831 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAF2O60831 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRAF2O60831 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRAF2O60831 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms