RNA–Protein interactions for RNA: ENST00000638309.1

STRADA-227, Transcript of STE20-related kinase adaptor alpha, humanhuman

TSL 5 BASIC

Gene STRADA, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-227ENST00000638309 NISCHQ9Y2I1 1504 aa23.82■■□□□ 1.4
STRADA-227ENST00000638309 ABCC9O60706 1549 aa22.44■■□□□ 1.18
STRADA-227ENST00000638309 CCDC180Q9P1Z9 1646 aa21.7■■□□□ 1.06
STRADA-227ENST00000638309 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
STRADA-227ENST00000638309 RB1CC1Q8TDY2 1594 aa21■□□□□ 0.95
STRADA-227ENST00000638309 PABPN1Q86U42 306 aaKnown RBP eCLIP20.77■□□□□ 0.92
STRADA-227ENST00000638309 NACADO15069 1562 aa20.65■□□□□ 0.9
STRADA-227ENST00000638309 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
STRADA-227ENST00000638309 DCAF8L2P0C7V8 631 aa20.49■□□□□ 0.87
STRADA-227ENST00000638309 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
STRADA-227ENST00000638309 DNAJC5Q9H3Z4 198 aa20.34■□□□□ 0.85
STRADA-227ENST00000638309 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
STRADA-227ENST00000638309 CC2D2AQ9P2K1 1620 aa20.22■□□□□ 0.83
STRADA-227ENST00000638309 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
STRADA-227ENST00000638309 SHROOM4Q9ULL8 1493 aa19.99■□□□□ 0.79
STRADA-227ENST00000638309 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
STRADA-227ENST00000638309 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
STRADA-227ENST00000638309 ZCCHC6Q5VYS8 1495 aaKnown RBP19.58■□□□□ 0.73
STRADA-227ENST00000638309 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
STRADA-227ENST00000638309 CUX2O14529 1486 aa19.56■□□□□ 0.72
STRADA-227ENST00000638309 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
STRADA-227ENST00000638309 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
STRADA-227ENST00000638309 NESP48681 1621 aa19.07■□□□□ 0.64
STRADA-227ENST00000638309 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
STRADA-227ENST00000638309 THOC2Q8NI27 1593 aaKnown RBP19■□□□□ 0.63
STRADA-227ENST00000638309 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
STRADA-227ENST00000638309 SMARCA2P51531 1590 aa18.9■□□□□ 0.62
STRADA-227ENST00000638309 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
STRADA-227ENST00000638309 KIF21AQ7Z4S6 1674 aa18.83■□□□□ 0.61
STRADA-227ENST00000638309 LAMC3Q9Y6N6 1575 aa18.77■□□□□ 0.6
STRADA-227ENST00000638309 SMARCA4P51532 1647 aa18.76■□□□□ 0.59
STRADA-227ENST00000638309 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
STRADA-227ENST00000638309 BAZ1AQ9NRL2 1556 aaPredicted RBP18.68■□□□□ 0.58
STRADA-227ENST00000638309 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
STRADA-227ENST00000638309 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
STRADA-227ENST00000638309 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
STRADA-227ENST00000638309 WDR62O43379 1518 aa18.55■□□□□ 0.56
STRADA-227ENST00000638309 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
STRADA-227ENST00000638309 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
STRADA-227ENST00000638309 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
STRADA-227ENST00000638309 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
STRADA-227ENST00000638309 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
STRADA-227ENST00000638309 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
STRADA-227ENST00000638309 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
STRADA-227ENST00000638309 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
STRADA-227ENST00000638309 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
STRADA-227ENST00000638309 FANCD2Q9BXW9 1451 aa18.28■□□□□ 0.52
STRADA-227ENST00000638309 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.51
STRADA-227ENST00000638309 CYB5RLQ6IPT4 315 aa18.21■□□□□ 0.51
STRADA-227ENST00000638309 URB2Q14146 1524 aaKnown RBP18.19■□□□□ 0.5
STRADA-227ENST00000638309 WIZO95785 1651 aa18.15■□□□□ 0.5
STRADA-227ENST00000638309 ZNF608Q9ULD9 1512 aaPredicted RBP18.09■□□□□ 0.49
STRADA-227ENST00000638309 CFTRP13569 1480 aa18.09■□□□□ 0.49
STRADA-227ENST00000638309 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
STRADA-227ENST00000638309 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
STRADA-227ENST00000638309 CHD1O14646 1710 aa18.01■□□□□ 0.47
STRADA-227ENST00000638309 IFT140Q96RY7 1462 aa18.01■□□□□ 0.47
STRADA-227ENST00000638309 EIF4G3O43432 1585 aaKnown RBP17.98■□□□□ 0.47
STRADA-227ENST00000638309 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
STRADA-227ENST00000638309 FBLN2P98095 1184 aa17.9■□□□□ 0.46
STRADA-227ENST00000638309 RSF1Q96T23 1441 aaPredicted RBP17.9■□□□□ 0.46
STRADA-227ENST00000638309 TOPBP1Q92547 1522 aa17.86■□□□□ 0.45
STRADA-227ENST00000638309 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.453e-6■■□□□ 13.8
STRADA-227ENST00000638309 TOP2AP11388 1531 aaKnown RBP17.83■□□□□ 0.45
STRADA-227ENST00000638309 TARBP1Q13395 1621 aaKnown RBP17.76■□□□□ 0.43
STRADA-227ENST00000638309 DNMBPQ6XZF7 1577 aa17.74■□□□□ 0.43
STRADA-227ENST00000638309 ABCC8Q09428 1581 aa17.72■□□□□ 0.43
STRADA-227ENST00000638309 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
STRADA-227ENST00000638309 SYNJ1O43426 1573 aa17.65■□□□□ 0.42
STRADA-227ENST00000638309 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
STRADA-227ENST00000638309 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
STRADA-227ENST00000638309 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
STRADA-227ENST00000638309 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
STRADA-227ENST00000638309 RAD54L2Q9Y4B4 1467 aa17.6■□□□□ 0.41
STRADA-227ENST00000638309 CHMP7Q8WUX9 453 aaPredicted RBP17.6■□□□□ 0.41
STRADA-227ENST00000638309 GAPVD1Q14C86 1478 aa17.59■□□□□ 0.41
STRADA-227ENST00000638309 ILDR1Q86SU0 546 aaPredicted RBP17.55■□□□□ 0.4
STRADA-227ENST00000638309 SOGA1O94964 1423 aa17.53■□□□□ 0.4
STRADA-227ENST00000638309 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
STRADA-227ENST00000638309 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
STRADA-227ENST00000638309 WDR97A6NE52 1622 aa17.48■□□□□ 0.39
STRADA-227ENST00000638309 GRIN2BQ13224 1484 aa17.46■□□□□ 0.39
STRADA-227ENST00000638309 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
STRADA-227ENST00000638309 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
STRADA-227ENST00000638309 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
STRADA-227ENST00000638309 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
STRADA-227ENST00000638309 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
STRADA-227ENST00000638309 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
STRADA-227ENST00000638309 CUX1P39880 1505 aa17.3■□□□□ 0.36
STRADA-227ENST00000638309 GRIN2AQ12879 1464 aa17.24■□□□□ 0.35
STRADA-227ENST00000638309 FAM69CQ0P6D2 419 aa17.23■□□□□ 0.35
STRADA-227ENST00000638309 ABCA5Q8WWZ7 1642 aa17.23■□□□□ 0.35
STRADA-227ENST00000638309 KDM6BO15054 1643 aa17.22■□□□□ 0.35
STRADA-227ENST00000638309 SHROOM2Q13796 1616 aa17.21■□□□□ 0.35
STRADA-227ENST00000638309 NUP160Q12769 1436 aa17.18■□□□□ 0.34
STRADA-227ENST00000638309 ABCC10Q5T3U5 1492 aa17.18■□□□□ 0.34
STRADA-227ENST00000638309 ADAMTS12P58397 1594 aa17.17■□□□□ 0.34
STRADA-227ENST00000638309 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
STRADA-227ENST00000638309 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
STRADA-227ENST00000638309 DIP2BQ9P265 1576 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms