RNA–Protein interactions for RNA: ENST00000638250.1

PAX6-232, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,483 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-232ENST00000638250 NISCHQ9Y2I1 1504 aa28.6■■■□□ 2.17
PAX6-232ENST00000638250 CCDC180Q9P1Z9 1646 aa25.45■■□□□ 1.67
PAX6-232ENST00000638250 ABCC9O60706 1549 aa24.93■■□□□ 1.58
PAX6-232ENST00000638250 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.56
PAX6-232ENST00000638250 RB1CC1Q8TDY2 1594 aa23.94■■□□□ 1.42
PAX6-232ENST00000638250 NACADO15069 1562 aa23.9■■□□□ 1.42
PAX6-232ENST00000638250 DCAF8L2P0C7V8 631 aa23.87■■□□□ 1.41
PAX6-232ENST00000638250 ZCCHC6Q5VYS8 1495 aaKnown RBP23.84■■□□□ 1.41
PAX6-232ENST00000638250 MYO15BQ96JP2 1530 aa23.75■■□□□ 1.39
PAX6-232ENST00000638250 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
PAX6-232ENST00000638250 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
PAX6-232ENST00000638250 UNC13AQ9UPW8 1703 aa23.51■■□□□ 1.35
PAX6-232ENST00000638250 BICRAQ9NZM4 1560 aa23.28■■□□□ 1.32
PAX6-232ENST00000638250 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
PAX6-232ENST00000638250 SCRIBQ14160 1630 aa23.24■■□□□ 1.31
PAX6-232ENST00000638250 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
PAX6-232ENST00000638250 DNAJC5BQ9UF47 199 aa22.92■■□□□ 1.26
PAX6-232ENST00000638250 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
PAX6-232ENST00000638250 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
PAX6-232ENST00000638250 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
PAX6-232ENST00000638250 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
PAX6-232ENST00000638250 BAZ1AQ9NRL2 1556 aaPredicted RBP22.15■■□□□ 1.14
PAX6-232ENST00000638250 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
PAX6-232ENST00000638250 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
PAX6-232ENST00000638250 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
PAX6-232ENST00000638250 SMARCA2P51531 1590 aa22.04■■□□□ 1.12
PAX6-232ENST00000638250 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
PAX6-232ENST00000638250 HMGXB3Q12766 1538 aa21.96■■□□□ 1.11
PAX6-232ENST00000638250 BAZ1BQ9UIG0 1483 aaKnown RBP21.89■■□□□ 1.09
PAX6-232ENST00000638250 WIZO95785 1651 aa21.86■■□□□ 1.09
PAX6-232ENST00000638250 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
PAX6-232ENST00000638250 NESP48681 1621 aa21.59■■□□□ 1.05
PAX6-232ENST00000638250 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.05
PAX6-232ENST00000638250 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
PAX6-232ENST00000638250 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
PAX6-232ENST00000638250 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
PAX6-232ENST00000638250 SENP3Q9H4L4 574 aaPredicted RBP21.36■■□□□ 1.01
PAX6-232ENST00000638250 KIF21AQ7Z4S6 1674 aa21.36■■□□□ 1.01
PAX6-232ENST00000638250 CCDC88BA6NC98 1476 aa21.33■■□□□ 1
PAX6-232ENST00000638250 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
PAX6-232ENST00000638250 CFTRP13569 1480 aa21.3■■□□□ 1
PAX6-232ENST00000638250 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
PAX6-232ENST00000638250 CUX2O14529 1486 aa21.24■□□□□ 0.99
PAX6-232ENST00000638250 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
PAX6-232ENST00000638250 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
PAX6-232ENST00000638250 FANCD2Q9BXW9 1451 aa21.18■□□□□ 0.98
PAX6-232ENST00000638250 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
PAX6-232ENST00000638250 MRC2Q9UBG0 1479 aa21.12■□□□□ 0.97
PAX6-232ENST00000638250 WDR62O43379 1518 aa21.08■□□□□ 0.97
PAX6-232ENST00000638250 URB2Q14146 1524 aaKnown RBP20.99■□□□□ 0.95
PAX6-232ENST00000638250 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
PAX6-232ENST00000638250 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
PAX6-232ENST00000638250 DNMBPQ6XZF7 1577 aa20.82■□□□□ 0.92
PAX6-232ENST00000638250 ABCC8Q09428 1581 aa20.79■□□□□ 0.92
PAX6-232ENST00000638250 CUX1P39880 1505 aa20.71■□□□□ 0.91
PAX6-232ENST00000638250 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
PAX6-232ENST00000638250 POLA1P09884 1462 aaPredicted RBP20.68■□□□□ 0.9
PAX6-232ENST00000638250 ZNF608Q9ULD9 1512 aaPredicted RBP20.65■□□□□ 0.9
PAX6-232ENST00000638250 TARBP1Q13395 1621 aaKnown RBP20.65■□□□□ 0.9
PAX6-232ENST00000638250 FGD5Q6ZNL6 1462 aa20.62■□□□□ 0.89
PAX6-232ENST00000638250 DNAJC5Q9H3Z4 198 aa20.61■□□□□ 0.89
PAX6-232ENST00000638250 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
PAX6-232ENST00000638250 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
PAX6-232ENST00000638250 SOGA1O94964 1423 aa20.56■□□□□ 0.88
PAX6-232ENST00000638250 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
PAX6-232ENST00000638250 BIVM-ERCC5R4GMW8 1640 aa20.52■□□□□ 0.88
PAX6-232ENST00000638250 WRNQ14191 1432 aaPredicted RBP eCLIP20.52■□□□□ 0.88
PAX6-232ENST00000638250 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.88
PAX6-232ENST00000638250 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
PAX6-232ENST00000638250 WDR97A6NE52 1622 aa20.5■□□□□ 0.87
PAX6-232ENST00000638250 TDRD9Q8NDG6 1382 aaKnown RBP20.46■□□□□ 0.87
PAX6-232ENST00000638250 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
PAX6-232ENST00000638250 ABCA5Q8WWZ7 1642 aa20.36■□□□□ 0.85
PAX6-232ENST00000638250 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
PAX6-232ENST00000638250 CHD1O14646 1710 aa20.34■□□□□ 0.85
PAX6-232ENST00000638250 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
PAX6-232ENST00000638250 OSCARQ8IYS5 282 aa20.33■□□□□ 0.85
PAX6-232ENST00000638250 GRIN2BQ13224 1484 aa20.32■□□□□ 0.84
PAX6-232ENST00000638250 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
PAX6-232ENST00000638250 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
PAX6-232ENST00000638250 FBLN2P98095 1184 aa20.24■□□□□ 0.83
PAX6-232ENST00000638250 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
PAX6-232ENST00000638250 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
PAX6-232ENST00000638250 ERICH3Q5RHP9 1530 aa20.16■□□□□ 0.82
PAX6-232ENST00000638250 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
PAX6-232ENST00000638250 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
PAX6-232ENST00000638250 RIMBP3CA6NJZ7 1639 aa20.08■□□□□ 0.81
PAX6-232ENST00000638250 RIMBP3BA6NNM3 1639 aa20.08■□□□□ 0.81
PAX6-232ENST00000638250 RIMBP3Q9UFD9 1639 aa20.08■□□□□ 0.81
PAX6-232ENST00000638250 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
PAX6-232ENST00000638250 GRIN2AQ12879 1464 aa20.08■□□□□ 0.8
PAX6-232ENST00000638250 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
PAX6-232ENST00000638250 ARHGEF11O15085 1522 aa20.05■□□□□ 0.8
PAX6-232ENST00000638250 IGF1RP08069 1367 aa20.02■□□□□ 0.8
PAX6-232ENST00000638250 CEP170Q5SW79 1584 aa20.01■□□□□ 0.79
PAX6-232ENST00000638250 TRIM41Q8WV44 630 aa19.99■□□□□ 0.79
PAX6-232ENST00000638250 NUP160Q12769 1436 aa19.99■□□□□ 0.79
PAX6-232ENST00000638250 CUL7Q14999 1698 aa19.98■□□□□ 0.79
PAX6-232ENST00000638250 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
PAX6-232ENST00000638250 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms