RNA–Protein interactions for RNA: ENST00000637128.1

LINC00959-202, Transcript of HCG1648656, isoform CRA_a, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LINC00959, Length 826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-202ENST00000637128 NISCHQ9Y2I1 1504 aa30.92■■■□□ 2.54
LINC00959-202ENST00000637128 AEBP2Q6ZN18 517 aaPredicted RBP30.08■■■□□ 2.41
LINC00959-202ENST00000637128 CHIC1Q5VXU3 224 aa28.08■■■□□ 2.09
LINC00959-202ENST00000637128 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
LINC00959-202ENST00000637128 ABCC9O60706 1549 aa26.93■■□□□ 1.9
LINC00959-202ENST00000637128 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
LINC00959-202ENST00000637128 NACADO15069 1562 aa25.79■■□□□ 1.72
LINC00959-202ENST00000637128 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
LINC00959-202ENST00000637128 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
LINC00959-202ENST00000637128 SENP3Q9H4L4 574 aaPredicted RBP25.7■■□□□ 1.7
LINC00959-202ENST00000637128 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
LINC00959-202ENST00000637128 DCAF1Q9Y4B6 1507 aa25.52■■□□□ 1.68
LINC00959-202ENST00000637128 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
LINC00959-202ENST00000637128 PHF23Q9BUL5 403 aaPredicted RBP25.35■■□□□ 1.65
LINC00959-202ENST00000637128 SCRIBQ14160 1630 aa25.17■■□□□ 1.62
LINC00959-202ENST00000637128 BICRAQ9NZM4 1560 aa25.16■■□□□ 1.62
LINC00959-202ENST00000637128 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.62
LINC00959-202ENST00000637128 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
LINC00959-202ENST00000637128 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
LINC00959-202ENST00000637128 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
LINC00959-202ENST00000637128 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
LINC00959-202ENST00000637128 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
LINC00959-202ENST00000637128 FOXD1Q16676 465 aa24.06■■□□□ 1.44
LINC00959-202ENST00000637128 SMARCA4P51532 1647 aa24.03■■□□□ 1.44
LINC00959-202ENST00000637128 BAZ1AQ9NRL2 1556 aaPredicted RBP23.94■■□□□ 1.42
LINC00959-202ENST00000637128 MROH2BQ7Z745 1585 aa23.88■■□□□ 1.41
LINC00959-202ENST00000637128 ATAD2BQ9ULI0 1458 aa23.85■■□□□ 1.41
LINC00959-202ENST00000637128 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
LINC00959-202ENST00000637128 NCAPD3P42695 1498 aa23.79■■□□□ 1.4
LINC00959-202ENST00000637128 PEG3Q9GZU2 1588 aa23.74■■□□□ 1.39
LINC00959-202ENST00000637128 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
LINC00959-202ENST00000637128 WIZO95785 1651 aa23.66■■□□□ 1.38
LINC00959-202ENST00000637128 BAZ1BQ9UIG0 1483 aaKnown RBP23.65■■□□□ 1.38
LINC00959-202ENST00000637128 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
LINC00959-202ENST00000637128 NESP48681 1621 aa23.35■■□□□ 1.33
LINC00959-202ENST00000637128 TOP2AP11388 1531 aaKnown RBP23.34■■□□□ 1.33
LINC00959-202ENST00000637128 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
LINC00959-202ENST00000637128 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
LINC00959-202ENST00000637128 KIF21AQ7Z4S6 1674 aa23.09■■□□□ 1.29
LINC00959-202ENST00000637128 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
LINC00959-202ENST00000637128 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
LINC00959-202ENST00000637128 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
LINC00959-202ENST00000637128 THOC2Q8NI27 1593 aaKnown RBP23■■□□□ 1.27
LINC00959-202ENST00000637128 CFTRP13569 1480 aa22.98■■□□□ 1.27
LINC00959-202ENST00000637128 PDS5BQ9NTI5 1447 aa22.97■■□□□ 1.27
LINC00959-202ENST00000637128 SUPT5HO00267 1087 aaKnown RBP22.95■■□□□ 1.26
LINC00959-202ENST00000637128 DNAJC5Q9H3Z4 198 aa22.95■■□□□ 1.26
LINC00959-202ENST00000637128 PRDM2Q13029 1718 aa22.91■■□□□ 1.26
LINC00959-202ENST00000637128 CUX2O14529 1486 aa22.88■■□□□ 1.25
LINC00959-202ENST00000637128 FANCD2Q9BXW9 1451 aa22.88■■□□□ 1.25
LINC00959-202ENST00000637128 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
LINC00959-202ENST00000637128 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
LINC00959-202ENST00000637128 WDR62O43379 1518 aa22.77■■□□□ 1.24
LINC00959-202ENST00000637128 URB2Q14146 1524 aaKnown RBP22.7■■□□□ 1.22
LINC00959-202ENST00000637128 MSH5O43196 834 aa22.67■■□□□ 1.22
LINC00959-202ENST00000637128 TOPBP1Q92547 1522 aa22.53■■□□□ 1.2
LINC00959-202ENST00000637128 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
LINC00959-202ENST00000637128 CUX1P39880 1505 aa22.41■■□□□ 1.18
LINC00959-202ENST00000637128 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
LINC00959-202ENST00000637128 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
LINC00959-202ENST00000637128 PIAS4Q8N2W9 510 aaPredicted RBP22.34■■□□□ 1.17
LINC00959-202ENST00000637128 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
LINC00959-202ENST00000637128 ZNF608Q9ULD9 1512 aaPredicted RBP22.33■■□□□ 1.17
LINC00959-202ENST00000637128 TARBP1Q13395 1621 aaKnown RBP22.32■■□□□ 1.16
LINC00959-202ENST00000637128 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
LINC00959-202ENST00000637128 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
LINC00959-202ENST00000637128 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
LINC00959-202ENST00000637128 SYNJ1O43426 1573 aa22.24■■□□□ 1.15
LINC00959-202ENST00000637128 BIVM-ERCC5R4GMW8 1640 aa22.2■■□□□ 1.15
LINC00959-202ENST00000637128 SOGA1O94964 1423 aa22.19■■□□□ 1.14
LINC00959-202ENST00000637128 WRNQ14191 1432 aaPredicted RBP eCLIP22.19■■□□□ 1.14
LINC00959-202ENST00000637128 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
LINC00959-202ENST00000637128 TOP2BQ02880 1626 aa22.18■■□□□ 1.14
LINC00959-202ENST00000637128 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
LINC00959-202ENST00000637128 AQRO60306 1485 aaKnown RBP eCLIP22.16■■□□□ 1.14
LINC00959-202ENST00000637128 PPP6R1Q9UPN7 881 aa22.14■■□□□ 1.13
LINC00959-202ENST00000637128 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
LINC00959-202ENST00000637128 ABCA10Q8WWZ4 1543 aa22.05■■□□□ 1.12
LINC00959-202ENST00000637128 ADRA2BP18089 450 aa22.03■■□□□ 1.12
LINC00959-202ENST00000637128 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
LINC00959-202ENST00000637128 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
LINC00959-202ENST00000637128 CHD1O14646 1710 aa22■■□□□ 1.11
LINC00959-202ENST00000637128 SNAPC4Q5SXM2 1469 aa21.98■■□□□ 1.11
LINC00959-202ENST00000637128 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
LINC00959-202ENST00000637128 GRIN2BQ13224 1484 aa21.94■■□□□ 1.1
LINC00959-202ENST00000637128 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
LINC00959-202ENST00000637128 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
LINC00959-202ENST00000637128 FBLN2P98095 1184 aa21.83■■□□□ 1.09
LINC00959-202ENST00000637128 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
LINC00959-202ENST00000637128 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
LINC00959-202ENST00000637128 ERICH3Q5RHP9 1530 aa21.76■■□□□ 1.07
LINC00959-202ENST00000637128 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
LINC00959-202ENST00000637128 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.07
LINC00959-202ENST00000637128 GRIN2AQ12879 1464 aa21.7■■□□□ 1.06
LINC00959-202ENST00000637128 KIF27Q86VH2 1401 aa21.69■■□□□ 1.06
LINC00959-202ENST00000637128 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
LINC00959-202ENST00000637128 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
LINC00959-202ENST00000637128 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
LINC00959-202ENST00000637128 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
LINC00959-202ENST00000637128 CEP170Q5SW79 1584 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms