RNA–Protein interactions for RNA: ENST00000636653.1

AC109635.4-201, humanhuman

TSL 1 (best) BASIC

Gene AC109635.4, Length 1,005 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109635.4-201ENST00000636653 AEBP2Q6ZN18 517 aaPredicted RBP30.84■■■□□ 2.53
AC109635.4-201ENST00000636653 CHIC1Q5VXU3 224 aa30.18■■■□□ 2.42
AC109635.4-201ENST00000636653 NISCHQ9Y2I1 1504 aa29.93■■■□□ 2.38
AC109635.4-201ENST00000636653 PHF23Q9BUL5 403 aaPredicted RBP26.61■■□□□ 1.85
AC109635.4-201ENST00000636653 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
AC109635.4-201ENST00000636653 SENP3Q9H4L4 574 aaPredicted RBP26.05■■□□□ 1.76
AC109635.4-201ENST00000636653 ABCC9O60706 1549 aa25.93■■□□□ 1.74
AC109635.4-201ENST00000636653 DCAF8L2P0C7V8 631 aa25.09■■□□□ 1.61
AC109635.4-201ENST00000636653 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
AC109635.4-201ENST00000636653 NACADO15069 1562 aa24.91■■□□□ 1.58
AC109635.4-201ENST00000636653 RB1CC1Q8TDY2 1594 aa24.88■■□□□ 1.57
AC109635.4-201ENST00000636653 MYO15BQ96JP2 1530 aa24.81■■□□□ 1.56
AC109635.4-201ENST00000636653 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
AC109635.4-201ENST00000636653 PLPPR3Q6T4P5 718 aa24.52■■□□□ 1.52
AC109635.4-201ENST00000636653 UNC13AQ9UPW8 1703 aa24.32■■□□□ 1.48
AC109635.4-201ENST00000636653 PABPN1Q86U42 306 aaKnown RBP eCLIP24.29■■□□□ 1.48
AC109635.4-201ENST00000636653 FOXD1Q16676 465 aa24.24■■□□□ 1.47
AC109635.4-201ENST00000636653 SCRIBQ14160 1630 aa24.18■■□□□ 1.46
AC109635.4-201ENST00000636653 BICRAQ9NZM4 1560 aa24.16■■□□□ 1.46
AC109635.4-201ENST00000636653 DNAJC5BQ9UF47 199 aa24.04■■□□□ 1.44
AC109635.4-201ENST00000636653 SHROOM4Q9ULL8 1493 aa23.86■■□□□ 1.41
AC109635.4-201ENST00000636653 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
AC109635.4-201ENST00000636653 PPP6R1Q9UPN7 881 aa23.46■■□□□ 1.35
AC109635.4-201ENST00000636653 CC2D2AQ9P2K1 1620 aa23.44■■□□□ 1.34
AC109635.4-201ENST00000636653 ADRA2BP18089 450 aa23.43■■□□□ 1.34
AC109635.4-201ENST00000636653 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
AC109635.4-201ENST00000636653 SMARCA4P51532 1647 aa23.15■■□□□ 1.3
AC109635.4-201ENST00000636653 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
AC109635.4-201ENST00000636653 MROH2BQ7Z745 1585 aa23.07■■□□□ 1.28
AC109635.4-201ENST00000636653 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
AC109635.4-201ENST00000636653 NCAPD3P42695 1498 aa23.04■■□□□ 1.28
AC109635.4-201ENST00000636653 SMARCA2P51531 1590 aa22.98■■□□□ 1.27
AC109635.4-201ENST00000636653 PEG3Q9GZU2 1588 aa22.93■■□□□ 1.26
AC109635.4-201ENST00000636653 RSF1Q96T23 1441 aaPredicted RBP22.9■■□□□ 1.26
AC109635.4-201ENST00000636653 PIAS4Q8N2W9 510 aaPredicted RBP22.85■■□□□ 1.25
AC109635.4-201ENST00000636653 HMGXB3Q12766 1538 aa22.85■■□□□ 1.25
AC109635.4-201ENST00000636653 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
AC109635.4-201ENST00000636653 WIZO95785 1651 aa22.8■■□□□ 1.24
AC109635.4-201ENST00000636653 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
AC109635.4-201ENST00000636653 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
AC109635.4-201ENST00000636653 NESP48681 1621 aa22.43■■□□□ 1.18
AC109635.4-201ENST00000636653 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
AC109635.4-201ENST00000636653 CCDC88BA6NC98 1476 aa22.36■■□□□ 1.17
AC109635.4-201ENST00000636653 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
AC109635.4-201ENST00000636653 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.17
AC109635.4-201ENST00000636653 CFTRP13569 1480 aa22.25■■□□□ 1.15
AC109635.4-201ENST00000636653 PDS5BQ9NTI5 1447 aa22.24■■□□□ 1.15
AC109635.4-201ENST00000636653 MSH5O43196 834 aa22.2■■□□□ 1.14
AC109635.4-201ENST00000636653 CUX2O14529 1486 aa22.18■■□□□ 1.14
AC109635.4-201ENST00000636653 KIF21AQ7Z4S6 1674 aa22.12■■□□□ 1.13
AC109635.4-201ENST00000636653 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
AC109635.4-201ENST00000636653 THOC2Q8NI27 1593 aaKnown RBP22.06■■□□□ 1.12
AC109635.4-201ENST00000636653 CEP164Q9UPV0 1460 aa22.02■■□□□ 1.12
AC109635.4-201ENST00000636653 MRC2Q9UBG0 1479 aa21.97■■□□□ 1.11
AC109635.4-201ENST00000636653 PRDM2Q13029 1718 aa21.94■■□□□ 1.1
AC109635.4-201ENST00000636653 WDR62O43379 1518 aa21.87■■□□□ 1.09
AC109635.4-201ENST00000636653 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
AC109635.4-201ENST00000636653 DNAJC5Q9H3Z4 198 aa21.81■■□□□ 1.08
AC109635.4-201ENST00000636653 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
AC109635.4-201ENST00000636653 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
AC109635.4-201ENST00000636653 DNMBPQ6XZF7 1577 aa21.69■■□□□ 1.06
AC109635.4-201ENST00000636653 PPP4R3CPQ6ZMV5 832 aa21.67■■□□□ 1.06
AC109635.4-201ENST00000636653 CUX1P39880 1505 aa21.63■■□□□ 1.05
AC109635.4-201ENST00000636653 IFT140Q96RY7 1462 aa21.58■■□□□ 1.04
AC109635.4-201ENST00000636653 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
AC109635.4-201ENST00000636653 WRNQ14191 1432 aaPredicted RBP eCLIP21.55■■□□□ 1.04
AC109635.4-201ENST00000636653 SOGA1O94964 1423 aa21.54■■□□□ 1.04
AC109635.4-201ENST00000636653 FGD5Q6ZNL6 1462 aa21.52■■□□□ 1.04
AC109635.4-201ENST00000636653 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
AC109635.4-201ENST00000636653 ZNF608Q9ULD9 1512 aaPredicted RBP21.49■■□□□ 1.03
AC109635.4-201ENST00000636653 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
AC109635.4-201ENST00000636653 TOP2BQ02880 1626 aa21.44■■□□□ 1.02
AC109635.4-201ENST00000636653 SYNJ1O43426 1573 aa21.44■■□□□ 1.02
AC109635.4-201ENST00000636653 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.02
AC109635.4-201ENST00000636653 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
AC109635.4-201ENST00000636653 TDRD9Q8NDG6 1382 aaKnown RBP21.41■■□□□ 1.02
AC109635.4-201ENST00000636653 KCNA4P22459 653 aa21.34■■□□□ 1.01
AC109635.4-201ENST00000636653 ABCA10Q8WWZ4 1543 aa21.33■■□□□ 1
AC109635.4-201ENST00000636653 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
AC109635.4-201ENST00000636653 SCAF1Q9H7N4 1312 aaKnown RBP21.31■■□□□ 1
AC109635.4-201ENST00000636653 OSCARQ8IYS5 282 aa21.29■■□□□ 1
AC109635.4-201ENST00000636653 WDR97A6NE52 1622 aa21.26■□□□□ 0.99
AC109635.4-201ENST00000636653 GAPVD1Q14C86 1478 aa21.26■□□□□ 0.99
AC109635.4-201ENST00000636653 MAPK8IP2Q13387 824 aaPredicted RBP21.25■□□□□ 0.99
AC109635.4-201ENST00000636653 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
AC109635.4-201ENST00000636653 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
AC109635.4-201ENST00000636653 FBLN2P98095 1184 aa21.17■□□□□ 0.98
AC109635.4-201ENST00000636653 ABCA5Q8WWZ7 1642 aa21.17■□□□□ 0.98
AC109635.4-201ENST00000636653 SNAPC4Q5SXM2 1469 aa21.16■□□□□ 0.98
AC109635.4-201ENST00000636653 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
AC109635.4-201ENST00000636653 MAGI1Q96QZ7 1491 aaPredicted RBP21.13■□□□□ 0.97
AC109635.4-201ENST00000636653 KIF27Q86VH2 1401 aa21.1■□□□□ 0.97
AC109635.4-201ENST00000636653 PBRM1Q86U86 1689 aa21.09■□□□□ 0.97
AC109635.4-201ENST00000636653 CHD1O14646 1710 aa21.09■□□□□ 0.97
AC109635.4-201ENST00000636653 NCBP3Q53F19 620 aaKnown RBP21.07■□□□□ 0.96
AC109635.4-201ENST00000636653 IGF1RP08069 1367 aa21.07■□□□□ 0.96
AC109635.4-201ENST00000636653 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
AC109635.4-201ENST00000636653 SYNJ2O15056 1496 aa21.06■□□□□ 0.96
AC109635.4-201ENST00000636653 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
AC109635.4-201ENST00000636653 CNKSR2Q8WXI2 1034 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms