RNA–Protein interactions for RNA: ENST00000636428.1

TMEM198B-209, Transcript of transmembrane protein 198B (pseudogene), humanhuman

TSL 2

Gene TMEM198B, Length 884 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM198B-209ENST00000636428 NISCHQ9Y2I1 1504 aa25.51■■□□□ 1.67
TMEM198B-209ENST00000636428 ABCC9O60706 1549 aa24.08■■□□□ 1.45
TMEM198B-209ENST00000636428 DNAJC5BQ9UF47 199 aa23.26■■□□□ 1.31
TMEM198B-209ENST00000636428 CCDC180Q9P1Z9 1646 aa23.26■■□□□ 1.31
TMEM198B-209ENST00000636428 RB1CC1Q8TDY2 1594 aa22.55■■□□□ 1.2
TMEM198B-209ENST00000636428 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
TMEM198B-209ENST00000636428 NACADO15069 1562 aa22.17■■□□□ 1.14
TMEM198B-209ENST00000636428 UNC13AQ9UPW8 1703 aa22.06■■□□□ 1.12
TMEM198B-209ENST00000636428 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
TMEM198B-209ENST00000636428 DNAJC5Q9H3Z4 198 aa21.96■■□□□ 1.11
TMEM198B-209ENST00000636428 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
TMEM198B-209ENST00000636428 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
TMEM198B-209ENST00000636428 CC2D2AQ9P2K1 1620 aa21.7■■□□□ 1.06
TMEM198B-209ENST00000636428 MYO15BQ96JP2 1530 aa21.55■■□□□ 1.04
TMEM198B-209ENST00000636428 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
TMEM198B-209ENST00000636428 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
TMEM198B-209ENST00000636428 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
TMEM198B-209ENST00000636428 CUX2O14529 1486 aa21.06■□□□□ 0.96
TMEM198B-209ENST00000636428 DCAF1Q9Y4B6 1507 aa20.99■□□□□ 0.95
TMEM198B-209ENST00000636428 ZCCHC6Q5VYS8 1495 aaKnown RBP20.95■□□□□ 0.94
TMEM198B-209ENST00000636428 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
TMEM198B-209ENST00000636428 TRIM41Q8WV44 630 aa20.75■□□□□ 0.91
TMEM198B-209ENST00000636428 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
TMEM198B-209ENST00000636428 NESP48681 1621 aa20.44■□□□□ 0.86
TMEM198B-209ENST00000636428 THOC2Q8NI27 1593 aaKnown RBP20.39■□□□□ 0.85
TMEM198B-209ENST00000636428 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
TMEM198B-209ENST00000636428 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
TMEM198B-209ENST00000636428 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
TMEM198B-209ENST00000636428 KIF21AQ7Z4S6 1674 aa20.18■□□□□ 0.82
TMEM198B-209ENST00000636428 LAMC3Q9Y6N6 1575 aa20.17■□□□□ 0.82
TMEM198B-209ENST00000636428 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
TMEM198B-209ENST00000636428 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
TMEM198B-209ENST00000636428 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
TMEM198B-209ENST00000636428 BAZ1AQ9NRL2 1556 aaPredicted RBP20.05■□□□□ 0.8
TMEM198B-209ENST00000636428 OSCARQ8IYS5 282 aa19.98■□□□□ 0.79
TMEM198B-209ENST00000636428 MRC2Q9UBG0 1479 aa19.95■□□□□ 0.78
TMEM198B-209ENST00000636428 WDR62O43379 1518 aa19.92■□□□□ 0.78
TMEM198B-209ENST00000636428 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
TMEM198B-209ENST00000636428 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
TMEM198B-209ENST00000636428 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
TMEM198B-209ENST00000636428 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
TMEM198B-209ENST00000636428 CADPSQ9ULU8 1353 aa19.82■□□□□ 0.76
TMEM198B-209ENST00000636428 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
TMEM198B-209ENST00000636428 CEP164Q9UPV0 1460 aa19.72■□□□□ 0.75
TMEM198B-209ENST00000636428 TRHP20396 242 aaPredicted RBP19.68■□□□□ 0.74
TMEM198B-209ENST00000636428 ARHGEF11O15085 1522 aa19.66■□□□□ 0.74
TMEM198B-209ENST00000636428 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
TMEM198B-209ENST00000636428 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
TMEM198B-209ENST00000636428 CYB5RLQ6IPT4 315 aa19.59■□□□□ 0.73
TMEM198B-209ENST00000636428 URB2Q14146 1524 aaKnown RBP19.49■□□□□ 0.71
TMEM198B-209ENST00000636428 WIZO95785 1651 aa19.41■□□□□ 0.7
TMEM198B-209ENST00000636428 CFTRP13569 1480 aa19.41■□□□□ 0.7
TMEM198B-209ENST00000636428 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
TMEM198B-209ENST00000636428 ZNF608Q9ULD9 1512 aaPredicted RBP19.39■□□□□ 0.69
TMEM198B-209ENST00000636428 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
TMEM198B-209ENST00000636428 CHD1O14646 1710 aa19.29■□□□□ 0.68
TMEM198B-209ENST00000636428 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
TMEM198B-209ENST00000636428 RSF1Q96T23 1441 aaPredicted RBP19.25■□□□□ 0.67
TMEM198B-209ENST00000636428 FBLN2P98095 1184 aa19.22■□□□□ 0.67
TMEM198B-209ENST00000636428 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
TMEM198B-209ENST00000636428 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
TMEM198B-209ENST00000636428 AQRO60306 1485 aaKnown RBP eCLIP19.12■□□□□ 0.65
TMEM198B-209ENST00000636428 TOP2AP11388 1531 aaKnown RBP19.08■□□□□ 0.64
TMEM198B-209ENST00000636428 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
TMEM198B-209ENST00000636428 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
TMEM198B-209ENST00000636428 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
TMEM198B-209ENST00000636428 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
TMEM198B-209ENST00000636428 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
TMEM198B-209ENST00000636428 ILDR1Q86SU0 546 aaPredicted RBP18.94■□□□□ 0.62
TMEM198B-209ENST00000636428 SNAPC4Q5SXM2 1469 aa18.91■□□□□ 0.62
TMEM198B-209ENST00000636428 CHMP7Q8WUX9 453 aaPredicted RBP18.91■□□□□ 0.62
TMEM198B-209ENST00000636428 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
TMEM198B-209ENST00000636428 GAPVD1Q14C86 1478 aa18.89■□□□□ 0.61
TMEM198B-209ENST00000636428 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
TMEM198B-209ENST00000636428 CCDC88BA6NC98 1476 aa18.87■□□□□ 0.61
TMEM198B-209ENST00000636428 RAD54L2Q9Y4B4 1467 aa18.86■□□□□ 0.61
TMEM198B-209ENST00000636428 SOGA1O94964 1423 aa18.81■□□□□ 0.6
TMEM198B-209ENST00000636428 MAGI1Q96QZ7 1491 aaPredicted RBP18.8■□□□□ 0.6
TMEM198B-209ENST00000636428 WDR97A6NE52 1622 aa18.77■□□□□ 0.6
TMEM198B-209ENST00000636428 SYNJ2O15056 1496 aa18.76■□□□□ 0.59
TMEM198B-209ENST00000636428 GRIN2BQ13224 1484 aa18.73■□□□□ 0.59
TMEM198B-209ENST00000636428 KIF13AQ9H1H9 1805 aa18.7■□□□□ 0.58
TMEM198B-209ENST00000636428 FGD5Q6ZNL6 1462 aa18.67■□□□□ 0.58
TMEM198B-209ENST00000636428 ERCC6L2Q5T890 1561 aa18.67■□□□□ 0.58
TMEM198B-209ENST00000636428 PBRM1Q86U86 1689 aa18.64■□□□□ 0.57
TMEM198B-209ENST00000636428 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
TMEM198B-209ENST00000636428 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
TMEM198B-209ENST00000636428 CEP170Q5SW79 1584 aa18.56■□□□□ 0.56
TMEM198B-209ENST00000636428 FAM69CQ0P6D2 419 aa18.53■□□□□ 0.56
TMEM198B-209ENST00000636428 CUX1P39880 1505 aa18.51■□□□□ 0.55
TMEM198B-209ENST00000636428 KDM6BO15054 1643 aa18.5■□□□□ 0.55
TMEM198B-209ENST00000636428 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
TMEM198B-209ENST00000636428 ABCC10Q5T3U5 1492 aa18.47■□□□□ 0.55
TMEM198B-209ENST00000636428 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
TMEM198B-209ENST00000636428 ABCA5Q8WWZ7 1642 aa18.45■□□□□ 0.54
TMEM198B-209ENST00000636428 NUP160Q12769 1436 aa18.43■□□□□ 0.54
TMEM198B-209ENST00000636428 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMEM198B-209ENST00000636428 DIP2BQ9P265 1576 aa18.41■□□□□ 0.54
TMEM198B-209ENST00000636428 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
TMEM198B-209ENST00000636428 TSPOAP1O95153 1857 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms