RNA–Protein interactions for RNA: ENST00000634930.1

AC012560.1-201, humanhuman

TSL 3 BASIC

Gene AC012560.1, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-201ENST00000634930 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
AC012560.1-201ENST00000634930 AEBP2Q6ZN18 517 aaPredicted RBP20.66■□□□□ 0.9
AC012560.1-201ENST00000634930 ABCC9O60706 1549 aa20.41■□□□□ 0.86
AC012560.1-201ENST00000634930 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
AC012560.1-201ENST00000634930 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
AC012560.1-201ENST00000634930 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.73
AC012560.1-201ENST00000634930 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
AC012560.1-201ENST00000634930 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
AC012560.1-201ENST00000634930 DNAJC5Q9H3Z4 198 aa18.75■□□□□ 0.59
AC012560.1-201ENST00000634930 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
AC012560.1-201ENST00000634930 NACADO15069 1562 aa18.66■□□□□ 0.58
AC012560.1-201ENST00000634930 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
AC012560.1-201ENST00000634930 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
AC012560.1-201ENST00000634930 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
AC012560.1-201ENST00000634930 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
AC012560.1-201ENST00000634930 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
AC012560.1-201ENST00000634930 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
AC012560.1-201ENST00000634930 MYO15BQ96JP2 1530 aa18.05■□□□□ 0.48
AC012560.1-201ENST00000634930 CUX2O14529 1486 aa17.89■□□□□ 0.45
AC012560.1-201ENST00000634930 SCRIBQ14160 1630 aa17.85■□□□□ 0.45
AC012560.1-201ENST00000634930 SENP3Q9H4L4 574 aaPredicted RBP17.75■□□□□ 0.43
AC012560.1-201ENST00000634930 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
AC012560.1-201ENST00000634930 ERCC6Q03468 1493 aa17.7■□□□□ 0.42
AC012560.1-201ENST00000634930 ZCCHC6Q5VYS8 1495 aaKnown RBP17.54■□□□□ 0.4
AC012560.1-201ENST00000634930 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
AC012560.1-201ENST00000634930 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
AC012560.1-201ENST00000634930 THOC2Q8NI27 1593 aaKnown RBP17.31■□□□□ 0.36
AC012560.1-201ENST00000634930 NESP48681 1621 aa17.29■□□□□ 0.36
AC012560.1-201ENST00000634930 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
AC012560.1-201ENST00000634930 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
AC012560.1-201ENST00000634930 KIF21AQ7Z4S6 1674 aa17.1■□□□□ 0.33
AC012560.1-201ENST00000634930 BAZ1AQ9NRL2 1556 aaPredicted RBP17.06■□□□□ 0.32
AC012560.1-201ENST00000634930 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
AC012560.1-201ENST00000634930 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
AC012560.1-201ENST00000634930 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
AC012560.1-201ENST00000634930 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
AC012560.1-201ENST00000634930 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
AC012560.1-201ENST00000634930 SMARCA4P51532 1647 aa16.88■□□□□ 0.29
AC012560.1-201ENST00000634930 RIMBP3CA6NJZ7 1639 aa16.87■□□□□ 0.29
AC012560.1-201ENST00000634930 RIMBP3BA6NNM3 1639 aa16.87■□□□□ 0.29
AC012560.1-201ENST00000634930 RIMBP3Q9UFD9 1639 aa16.87■□□□□ 0.29
AC012560.1-201ENST00000634930 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
AC012560.1-201ENST00000634930 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
AC012560.1-201ENST00000634930 WDR62O43379 1518 aa16.85■□□□□ 0.29
AC012560.1-201ENST00000634930 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
AC012560.1-201ENST00000634930 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
AC012560.1-201ENST00000634930 PEG3Q9GZU2 1588 aa16.67■□□□□ 0.26
AC012560.1-201ENST00000634930 CADPSQ9ULU8 1353 aa16.64■□□□□ 0.25
AC012560.1-201ENST00000634930 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
AC012560.1-201ENST00000634930 CYB5RLQ6IPT4 315 aa16.57■□□□□ 0.24
AC012560.1-201ENST00000634930 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
AC012560.1-201ENST00000634930 ARAP1Q96P48 1450 aa16.48■□□□□ 0.23
AC012560.1-201ENST00000634930 FOXD1Q16676 465 aa16.47■□□□□ 0.23
AC012560.1-201ENST00000634930 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
AC012560.1-201ENST00000634930 URB2Q14146 1524 aaKnown RBP16.43■□□□□ 0.22
AC012560.1-201ENST00000634930 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
AC012560.1-201ENST00000634930 CHD1O14646 1710 aa16.37■□□□□ 0.21
AC012560.1-201ENST00000634930 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
AC012560.1-201ENST00000634930 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
AC012560.1-201ENST00000634930 CFTRP13569 1480 aa16.28■□□□□ 0.2
AC012560.1-201ENST00000634930 RSF1Q96T23 1441 aaPredicted RBP16.28■□□□□ 0.2
AC012560.1-201ENST00000634930 WIZO95785 1651 aa16.27■□□□□ 0.2
AC012560.1-201ENST00000634930 ILDR1Q86SU0 546 aaPredicted RBP16.24■□□□□ 0.19
AC012560.1-201ENST00000634930 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
AC012560.1-201ENST00000634930 FBLN2P98095 1184 aa16.18■□□□□ 0.18
AC012560.1-201ENST00000634930 TOPBP1Q92547 1522 aa16.1■□□□□ 0.17
AC012560.1-201ENST00000634930 AQRO60306 1485 aaKnown RBP eCLIP16.09■□□□□ 0.17
AC012560.1-201ENST00000634930 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
AC012560.1-201ENST00000634930 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
AC012560.1-201ENST00000634930 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
AC012560.1-201ENST00000634930 DNMBPQ6XZF7 1577 aa15.99■□□□□ 0.15
AC012560.1-201ENST00000634930 TOP2AP11388 1531 aaKnown RBP15.98■□□□□ 0.15
AC012560.1-201ENST00000634930 GAPVD1Q14C86 1478 aa15.97■□□□□ 0.15
AC012560.1-201ENST00000634930 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
AC012560.1-201ENST00000634930 ABCC8Q09428 1581 aa15.96■□□□□ 0.14
AC012560.1-201ENST00000634930 KIF13AQ9H1H9 1805 aa15.9■□□□□ 0.14
AC012560.1-201ENST00000634930 POLA1P09884 1462 aaPredicted RBP15.89■□□□□ 0.13
AC012560.1-201ENST00000634930 CHMP7Q8WUX9 453 aaPredicted RBP15.87■□□□□ 0.13
AC012560.1-201ENST00000634930 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
AC012560.1-201ENST00000634930 RAD54L2Q9Y4B4 1467 aa15.85■□□□□ 0.13
AC012560.1-201ENST00000634930 MAGI1Q96QZ7 1491 aaPredicted RBP15.83■□□□□ 0.12
AC012560.1-201ENST00000634930 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
AC012560.1-201ENST00000634930 WDR97A6NE52 1622 aa15.79■□□□□ 0.12
AC012560.1-201ENST00000634930 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
AC012560.1-201ENST00000634930 SYNJ2O15056 1496 aa15.79■□□□□ 0.12
AC012560.1-201ENST00000634930 CCDC88BA6NC98 1476 aa15.76■□□□□ 0.11
AC012560.1-201ENST00000634930 SOGA1O94964 1423 aa15.76■□□□□ 0.11
AC012560.1-201ENST00000634930 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
AC012560.1-201ENST00000634930 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
AC012560.1-201ENST00000634930 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
AC012560.1-201ENST00000634930 KDM6BO15054 1643 aa15.73■□□□□ 0.11
AC012560.1-201ENST00000634930 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
AC012560.1-201ENST00000634930 HECW2Q9P2P5 1572 aa15.68■□□□□ 0.1
AC012560.1-201ENST00000634930 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
AC012560.1-201ENST00000634930 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
AC012560.1-201ENST00000634930 TSPOAP1O95153 1857 aa15.62■□□□□ 0.09
AC012560.1-201ENST00000634930 DIP2BQ9P265 1576 aa15.62■□□□□ 0.09
AC012560.1-201ENST00000634930 ABCC10Q5T3U5 1492 aa15.61■□□□□ 0.09
AC012560.1-201ENST00000634930 ADGRL1O94910 1474 aa15.59■□□□□ 0.09
AC012560.1-201ENST00000634930 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms