RNA–Protein interactions for RNA: ENST00000631335.1

SCRN1-210, Transcript of secernin 1, humanhuman

TSL 5 BASIC

Gene SCRN1, Length 423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-210ENST00000631335 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
SCRN1-210ENST00000631335 ABCC9O60706 1549 aa16.22■□□□□ 0.19
SCRN1-210ENST00000631335 CCDC180Q9P1Z9 1646 aa15.97■□□□□ 0.15
SCRN1-210ENST00000631335 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
SCRN1-210ENST00000631335 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
SCRN1-210ENST00000631335 NACADO15069 1562 aa15.12■□□□□ 0.01
SCRN1-210ENST00000631335 UNC13AQ9UPW8 1703 aa15.02□□□□□ -0.01
SCRN1-210ENST00000631335 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
SCRN1-210ENST00000631335 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
SCRN1-210ENST00000631335 MYO15BQ96JP2 1530 aa14.78□□□□□ -0.04
SCRN1-210ENST00000631335 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
SCRN1-210ENST00000631335 SHROOM4Q9ULL8 1493 aa14.73□□□□□ -0.05
SCRN1-210ENST00000631335 CC2D2AQ9P2K1 1620 aa14.68□□□□□ -0.06
SCRN1-210ENST00000631335 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
SCRN1-210ENST00000631335 EIF4G1Q04637 1599 aaKnown RBP14.56□□□□□ -0.08
SCRN1-210ENST00000631335 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
SCRN1-210ENST00000631335 SCRIBQ14160 1630 aa14.45□□□□□ -0.1
SCRN1-210ENST00000631335 DCAF1Q9Y4B6 1507 aa14.43□□□□□ -0.1
SCRN1-210ENST00000631335 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
SCRN1-210ENST00000631335 CUX2O14529 1486 aa14.22□□□□□ -0.13
SCRN1-210ENST00000631335 ERCC6Q03468 1493 aa14.09□□□□□ -0.15
SCRN1-210ENST00000631335 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
SCRN1-210ENST00000631335 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
SCRN1-210ENST00000631335 THOC2Q8NI27 1593 aaKnown RBP13.85□□□□□ -0.19
SCRN1-210ENST00000631335 SMARCA2P51531 1590 aa13.82□□□□□ -0.2
SCRN1-210ENST00000631335 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
SCRN1-210ENST00000631335 NESP48681 1621 aa13.8□□□□□ -0.2
SCRN1-210ENST00000631335 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
SCRN1-210ENST00000631335 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
SCRN1-210ENST00000631335 LAMC3Q9Y6N6 1575 aa13.74□□□□□ -0.21
SCRN1-210ENST00000631335 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
SCRN1-210ENST00000631335 BAZ1BQ9UIG0 1483 aaKnown RBP13.69□□□□□ -0.22
SCRN1-210ENST00000631335 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
SCRN1-210ENST00000631335 PDS5BQ9NTI5 1447 aa13.62□□□□□ -0.23
SCRN1-210ENST00000631335 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
SCRN1-210ENST00000631335 MRC2Q9UBG0 1479 aa13.55□□□□□ -0.24
SCRN1-210ENST00000631335 WDR62O43379 1518 aa13.54□□□□□ -0.24
SCRN1-210ENST00000631335 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
SCRN1-210ENST00000631335 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
SCRN1-210ENST00000631335 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
SCRN1-210ENST00000631335 OSCARQ8IYS5 282 aa13.37□□□□□ -0.27
SCRN1-210ENST00000631335 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
SCRN1-210ENST00000631335 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
SCRN1-210ENST00000631335 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
SCRN1-210ENST00000631335 FANCD2Q9BXW9 1451 aa13.33□□□□□ -0.28
SCRN1-210ENST00000631335 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
SCRN1-210ENST00000631335 WIZO95785 1651 aa13.27□□□□□ -0.29
SCRN1-210ENST00000631335 URB2Q14146 1524 aaKnown RBP13.23□□□□□ -0.29
SCRN1-210ENST00000631335 PRDM2Q13029 1718 aa13.23□□□□□ -0.29
SCRN1-210ENST00000631335 CFTRP13569 1480 aa13.23□□□□□ -0.29
SCRN1-210ENST00000631335 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
SCRN1-210ENST00000631335 EIF4G3O43432 1585 aaKnown RBP13.13□□□□□ -0.31
SCRN1-210ENST00000631335 CHD1O14646 1710 aa13.12□□□□□ -0.31
SCRN1-210ENST00000631335 ZNF608Q9ULD9 1512 aaPredicted RBP13.12□□□□□ -0.31
SCRN1-210ENST00000631335 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
SCRN1-210ENST00000631335 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
SCRN1-210ENST00000631335 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
SCRN1-210ENST00000631335 CYB5RLQ6IPT4 315 aa13.07□□□□□ -0.32
SCRN1-210ENST00000631335 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
SCRN1-210ENST00000631335 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
SCRN1-210ENST00000631335 AEBP2Q6ZN18 517 aaPredicted RBP13.04□□□□□ -0.32
SCRN1-210ENST00000631335 ABCC8Q09428 1581 aa13□□□□□ -0.33
SCRN1-210ENST00000631335 DNMBPQ6XZF7 1577 aa12.99□□□□□ -0.33
SCRN1-210ENST00000631335 TARBP1Q13395 1621 aaKnown RBP12.97□□□□□ -0.33
SCRN1-210ENST00000631335 CLASP1Q7Z460 1538 aa12.93□□□□□ -0.34
SCRN1-210ENST00000631335 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCRN1-210ENST00000631335 SYNJ1O43426 1573 aa12.9□□□□□ -0.34
SCRN1-210ENST00000631335 FBLN2P98095 1184 aa12.9□□□□□ -0.34
SCRN1-210ENST00000631335 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
SCRN1-210ENST00000631335 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
SCRN1-210ENST00000631335 POLA1P09884 1462 aaPredicted RBP12.87□□□□□ -0.35
SCRN1-210ENST00000631335 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
SCRN1-210ENST00000631335 MAGI1Q96QZ7 1491 aaPredicted RBP12.83□□□□□ -0.36
SCRN1-210ENST00000631335 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
SCRN1-210ENST00000631335 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
SCRN1-210ENST00000631335 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
SCRN1-210ENST00000631335 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
SCRN1-210ENST00000631335 SOGA1O94964 1423 aa12.76□□□□□ -0.37
SCRN1-210ENST00000631335 PBRM1Q86U86 1689 aa12.76□□□□□ -0.37
SCRN1-210ENST00000631335 GRIN2BQ13224 1484 aa12.75□□□□□ -0.37
SCRN1-210ENST00000631335 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
SCRN1-210ENST00000631335 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
SCRN1-210ENST00000631335 KIF13AQ9H1H9 1805 aa12.67□□□□□ -0.38
SCRN1-210ENST00000631335 CUX1P39880 1505 aa12.65□□□□□ -0.38
SCRN1-210ENST00000631335 ABCA5Q8WWZ7 1642 aa12.65□□□□□ -0.38
SCRN1-210ENST00000631335 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
SCRN1-210ENST00000631335 CEP170Q5SW79 1584 aa12.61□□□□□ -0.39
SCRN1-210ENST00000631335 SHROOM2Q13796 1616 aa12.6□□□□□ -0.39
SCRN1-210ENST00000631335 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
SCRN1-210ENST00000631335 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
SCRN1-210ENST00000631335 ABCA10Q8WWZ4 1543 aa12.57□□□□□ -0.4
SCRN1-210ENST00000631335 NUP160Q12769 1436 aa12.55□□□□□ -0.4
SCRN1-210ENST00000631335 KDM6BO15054 1643 aa12.52□□□□□ -0.4
SCRN1-210ENST00000631335 DIP2BQ9P265 1576 aa12.51□□□□□ -0.41
SCRN1-210ENST00000631335 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
SCRN1-210ENST00000631335 ABCC10Q5T3U5 1492 aa12.49□□□□□ -0.41
SCRN1-210ENST00000631335 ILDR1Q86SU0 546 aaPredicted RBP12.48□□□□□ -0.41
SCRN1-210ENST00000631335 FHAD1B1AJZ9 1412 aa12.46□□□□□ -0.41
SCRN1-210ENST00000631335 PRG4Q92954 1404 aaPredicted RBP12.44□□□□□ -0.42
SCRN1-210ENST00000631335 ERICH3Q5RHP9 1530 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms