RNA–Protein interactions for RNA: ENST00000631182.2

SCN2A-207, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-207ENST00000631182 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
SCN2A-207ENST00000631182 PELP1Q8IZL8 1130 aaKnown RBP9.4□□□□□ -0.9
SCN2A-207ENST00000631182 DCAF8L2P0C7V8 631 aa9.12□□□□□ -0.95
SCN2A-207ENST00000631182 CCER1Q8TC90 406 aaPredicted RBP8.94□□□□□ -0.98
SCN2A-207ENST00000631182 MYT1Q01538 1121 aa8.92□□□□□ -0.98
SCN2A-207ENST00000631182 ERICH6Q7L0X2 663 aa8.88□□□□□ -0.99
SCN2A-207ENST00000631182 SUPT5HO00267 1087 aaKnown RBP8.88□□□□□ -0.99
SCN2A-207ENST00000631182 YTHDC1Q96MU7 727 aaKnown RBP8.79□□□□□ -1
SCN2A-207ENST00000631182 SHROOM4Q9ULL8 1493 aa8.78□□□□□ -1
SCN2A-207ENST00000631182 FAM9AQ8IZU1 332 aaPredicted RBP8.61□□□□□ -1.03
SCN2A-207ENST00000631182 CENPBP07199 599 aaPredicted RBP8.5□□□□□ -1.05
SCN2A-207ENST00000631182 TTBK1Q5TCY1 1321 aaPredicted RBP8.49□□□□□ -1.05
SCN2A-207ENST00000631182 APLP2Q06481 763 aa8.48□□□□□ -1.05
SCN2A-207ENST00000631182 DAXXQ9UER7 740 aaPredicted RBP8.46□□□□□ -1.06
SCN2A-207ENST00000631182 NEFLP07196 543 aa8.43□□□□□ -1.06
SCN2A-207ENST00000631182 TRIM41Q8WV44 630 aa8.31□□□□□ -1.08
SCN2A-207ENST00000631182 CHIC1Q5VXU3 224 aa8.28□□□□□ -1.08
SCN2A-207ENST00000631182 ZEB1P37275 1124 aaPredicted RBP8.26□□□□□ -1.09
SCN2A-207ENST00000631182 PCGF6Q9BYE7 350 aa8.25□□□□□ -1.09
SCN2A-207ENST00000631182 EHMT2Q96KQ7 1210 aa8.22□□□□□ -1.09
SCN2A-207ENST00000631182 ZNF316A6NFI3 1004 aaPredicted RBP8.17□□□□□ -1.1
SCN2A-207ENST00000631182 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
SCN2A-207ENST00000631182 ZCCHC6Q5VYS8 1495 aaKnown RBP8.14□□□□□ -1.11
SCN2A-207ENST00000631182 CLSPNQ9HAW4 1339 aa8.09□□□□□ -1.11
SCN2A-207ENST00000631182 TRIM26Q12899 539 aaPredicted RBP8.08□□□□□ -1.12
SCN2A-207ENST00000631182 UBTFP17480 764 aaKnown RBP8.06□□□□□ -1.12
SCN2A-207ENST00000631182 HRCP23327 699 aa8.06□□□□□ -1.12
SCN2A-207ENST00000631182 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
SCN2A-207ENST00000631182 ABCC9O60706 1549 aa8.03□□□□□ -1.12
SCN2A-207ENST00000631182 LOC105371045A0A1W2PR82 267 aa8.02□□□□□ -1.13
SCN2A-207ENST00000631182 CCDC180Q9P1Z9 1646 aa7.97□□□□□ -1.13
SCN2A-207ENST00000631182 ZBTB47Q9UFB7 747 aaPredicted RBP7.94□□□□□ -1.14
SCN2A-207ENST00000631182 ANP32BQ92688 251 aaKnown RBP7.92□□□□□ -1.14
SCN2A-207ENST00000631182 RANGAP1P46060 587 aaPredicted RBP7.91□□□□□ -1.14
SCN2A-207ENST00000631182 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.15
SCN2A-207ENST00000631182 DCAF1Q9Y4B6 1507 aa7.89□□□□□ -1.15
SCN2A-207ENST00000631182 NEFMP07197 916 aa7.86□□□□□ -1.15
SCN2A-207ENST00000631182 PABPN1Q86U42 306 aaKnown RBP eCLIP7.86□□□□□ -1.15
SCN2A-207ENST00000631182 PPARGC1BQ86YN6 1023 aaKnown RBP7.85□□□□□ -1.15
SCN2A-207ENST00000631182 CSRNP3Q8WYN3 585 aa7.82□□□□□ -1.16
SCN2A-207ENST00000631182 CDK11BP21127 795 aaKnown RBP7.81□□□□□ -1.16
SCN2A-207ENST00000631182 CDK11AQ9UQ88 783 aaPredicted RBP7.81□□□□□ -1.16
SCN2A-207ENST00000631182 RSF1Q96T23 1441 aaPredicted RBP7.8□□□□□ -1.16
SCN2A-207ENST00000631182 SCRIBQ14160 1630 aa7.8□□□□□ -1.16
SCN2A-207ENST00000631182 SLC4A1APQ9BWU0 796 aaKnown RBP7.78□□□□□ -1.16
SCN2A-207ENST00000631182 MYT1LQ9UL68 1186 aa7.78□□□□□ -1.16
SCN2A-207ENST00000631182 TNNT2P45379 298 aaPredicted RBP7.76□□□□□ -1.17
SCN2A-207ENST00000631182 POLR3GLQ9BT43 218 aa7.76□□□□□ -1.17
SCN2A-207ENST00000631182 HNRNPUL2Q1KMD3 747 aaKnown RBP7.75□□□□□ -1.17
SCN2A-207ENST00000631182 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.72□□□□□ -1.17
SCN2A-207ENST00000631182 EIF5BO60841 1220 aaKnown RBP7.72□□□□□ -1.17
SCN2A-207ENST00000631182 NACADO15069 1562 aa7.72□□□□□ -1.17
SCN2A-207ENST00000631182 MYO15BQ96JP2 1530 aa7.7□□□□□ -1.18
SCN2A-207ENST00000631182 ANP32AP39687 249 aaKnown RBP7.7□□□□□ -1.18
SCN2A-207ENST00000631182 EEA1Q15075 1411 aa7.69□□□□□ -1.18
SCN2A-207ENST00000631182 RB1CC1Q8TDY2 1594 aa7.67□□□□□ -1.18
SCN2A-207ENST00000631182 ITGAEP38570 1179 aa7.67□□□□□ -1.18
SCN2A-207ENST00000631182 HSP90AA1P07900 732 aaKnown RBP7.66□□□□□ -1.18
SCN2A-207ENST00000631182 CANXP27824 592 aaKnown RBP7.65□□□□□ -1.18
SCN2A-207ENST00000631182 DIEXFQ68CQ4 756 aaKnown RBP7.64□□□□□ -1.19
SCN2A-207ENST00000631182 UPF2Q9HAU5 1272 aaKnown RBP7.64□□□□□ -1.19
SCN2A-207ENST00000631182 TRIM44Q96DX7 344 aaPredicted RBP7.63□□□□□ -1.19
SCN2A-207ENST00000631182 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
SCN2A-207ENST00000631182 BAZ1AQ9NRL2 1556 aaPredicted RBP7.6□□□□□ -1.19
SCN2A-207ENST00000631182 CECR2Q9BXF3 1484 aa7.6□□□□□ -1.19
SCN2A-207ENST00000631182 WRNQ14191 1432 aaPredicted RBP eCLIP7.58□□□□□ -1.2
SCN2A-207ENST00000631182 TNIKQ9UKE5 1360 aa7.57□□□□□ -1.2
SCN2A-207ENST00000631182 FAM50AQ14320 339 aaKnown RBP7.57□□□□□ -1.2
SCN2A-207ENST00000631182 CLIP1P30622 1438 aa7.55□□□□□ -1.2
SCN2A-207ENST00000631182 NCLP19338 710 aaKnown RBP7.55□□□□□ -1.2
SCN2A-207ENST00000631182 ANP32EQ9BTT0 268 aa7.55□□□□□ -1.2
SCN2A-207ENST00000631182 GOLGA3Q08378 1498 aa7.54□□□□□ -1.2
SCN2A-207ENST00000631182 CEP162Q5TB80 1403 aa7.53□□□□□ -1.2
SCN2A-207ENST00000631182 CNGB1Q14028 1251 aaPredicted RBP7.52□□□□□ -1.21
SCN2A-207ENST00000631182 ANP32CO43423 234 aa7.51□□□□□ -1.21
SCN2A-207ENST00000631182 BAZ1BQ9UIG0 1483 aaKnown RBP7.51□□□□□ -1.21
SCN2A-207ENST00000631182 MROH2BQ7Z745 1585 aa7.5□□□□□ -1.21
SCN2A-207ENST00000631182 CEP164Q9UPV0 1460 aa7.5□□□□□ -1.21
SCN2A-207ENST00000631182 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
SCN2A-207ENST00000631182 TRIM52Q96A61 297 aa7.47□□□□□ -1.21
SCN2A-207ENST00000631182 L1TD1Q5T7N2 865 aaKnown RBP7.47□□□□□ -1.21
SCN2A-207ENST00000631182 P3H3Q8IVL6 736 aa7.47□□□□□ -1.21
SCN2A-207ENST00000631182 KIF27Q86VH2 1401 aa7.47□□□□□ -1.21
SCN2A-207ENST00000631182 ACIN1Q9UKV3 1341 aaKnown RBP7.47□□□□□ -1.21
SCN2A-207ENST00000631182 BCL11AQ9H165 835 aa7.46□□□□□ -1.21
SCN2A-207ENST00000631182 GOLGA6L6A8MZA4 724 aa7.45□□□□□ -1.22
SCN2A-207ENST00000631182 NEUROD1Q13562 356 aa7.45□□□□□ -1.22
SCN2A-207ENST00000631182 GOLGA6L22H0YM25 854 aa7.43□□□□□ -1.22
SCN2A-207ENST00000631182 CCDC88BA6NC98 1476 aa7.43□□□□□ -1.22
SCN2A-207ENST00000631182 GTF3C3Q9Y5Q9 886 aa7.42□□□□□ -1.22
SCN2A-207ENST00000631182 SOGA1O94964 1423 aa7.42□□□□□ -1.22
SCN2A-207ENST00000631182 NRDCO43847 1150 aa7.42□□□□□ -1.22
SCN2A-207ENST00000631182 CALRP27797 417 aaKnown RBP7.41□□□□□ -1.22
SCN2A-207ENST00000631182 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
SCN2A-207ENST00000631182 DNTTIP2Q5QJE6 756 aaKnown RBP7.4□□□□□ -1.22
SCN2A-207ENST00000631182 ZNF326Q5BKZ1 582 aaKnown RBP7.4□□□□□ -1.22
SCN2A-207ENST00000631182 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.4□□□□□ -1.23
SCN2A-207ENST00000631182 BECN1Q14457 450 aa7.39□□□□□ -1.23
SCN2A-207ENST00000631182 FBLN2P98095 1184 aa7.39□□□□□ -1.23
SCN2A-207ENST00000631182 TOP2AP11388 1531 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms