RNA–Protein interactions for RNA: ENST00000628157.1

SKIV2L-216, Transcript of Ski2 like RNA helicase, humanhuman

TSL 5 BASIC

Gene SKIV2L, Length 210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-216ENST00000628157 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
SKIV2L-216ENST00000628157 ABCC9O60706 1549 aa18.07■□□□□ 0.48
SKIV2L-216ENST00000628157 DNAJC5BQ9UF47 199 aa17.47■□□□□ 0.39
SKIV2L-216ENST00000628157 CCDC180Q9P1Z9 1646 aa17.21■□□□□ 0.35
SKIV2L-216ENST00000628157 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.28
SKIV2L-216ENST00000628157 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
SKIV2L-216ENST00000628157 DCAF8L2P0C7V8 631 aa16.56■□□□□ 0.24
SKIV2L-216ENST00000628157 DNAJC5Q9H3Z4 198 aa16.46■□□□□ 0.23
SKIV2L-216ENST00000628157 NACADO15069 1562 aa16.46■□□□□ 0.23
SKIV2L-216ENST00000628157 UNC13AQ9UPW8 1703 aa16.33■□□□□ 0.21
SKIV2L-216ENST00000628157 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
SKIV2L-216ENST00000628157 BICRAQ9NZM4 1560 aa16.28■□□□□ 0.2
SKIV2L-216ENST00000628157 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
SKIV2L-216ENST00000628157 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
SKIV2L-216ENST00000628157 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
SKIV2L-216ENST00000628157 MYO15BQ96JP2 1530 aa15.91■□□□□ 0.14
SKIV2L-216ENST00000628157 SCRIBQ14160 1630 aa15.83■□□□□ 0.13
SKIV2L-216ENST00000628157 CUX2O14529 1486 aa15.71■□□□□ 0.1
SKIV2L-216ENST00000628157 TRIM41Q8WV44 630 aa15.69■□□□□ 0.1
SKIV2L-216ENST00000628157 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
SKIV2L-216ENST00000628157 ZCCHC6Q5VYS8 1495 aaKnown RBP15.57■□□□□ 0.08
SKIV2L-216ENST00000628157 DCAF1Q9Y4B6 1507 aa15.5■□□□□ 0.07
SKIV2L-216ENST00000628157 NESP48681 1621 aa15.31■□□□□ 0.04
SKIV2L-216ENST00000628157 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
SKIV2L-216ENST00000628157 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
SKIV2L-216ENST00000628157 THOC2Q8NI27 1593 aaKnown RBP15.19■□□□□ 0.02
SKIV2L-216ENST00000628157 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
SKIV2L-216ENST00000628157 HMGXB3Q12766 1538 aa15.03■□□□□ -0
SKIV2L-216ENST00000628157 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
SKIV2L-216ENST00000628157 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
SKIV2L-216ENST00000628157 LAMC3Q9Y6N6 1575 aa14.98□□□□□ -0.01
SKIV2L-216ENST00000628157 PDS5BQ9NTI5 1447 aa14.97□□□□□ -0.01
SKIV2L-216ENST00000628157 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
SKIV2L-216ENST00000628157 OSCARQ8IYS5 282 aa14.95□□□□□ -0.02
SKIV2L-216ENST00000628157 SMARCA4P51532 1647 aa14.93□□□□□ -0.02
SKIV2L-216ENST00000628157 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
SKIV2L-216ENST00000628157 AEBP2Q6ZN18 517 aaPredicted RBP14.89□□□□□ -0.03
SKIV2L-216ENST00000628157 TRHP20396 242 aaPredicted RBP14.84□□□□□ -0.03
SKIV2L-216ENST00000628157 WDR62O43379 1518 aa14.82□□□□□ -0.04
SKIV2L-216ENST00000628157 RIMBP3CA6NJZ7 1639 aa14.81□□□□□ -0.04
SKIV2L-216ENST00000628157 RIMBP3BA6NNM3 1639 aa14.81□□□□□ -0.04
SKIV2L-216ENST00000628157 RIMBP3Q9UFD9 1639 aa14.81□□□□□ -0.04
SKIV2L-216ENST00000628157 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.04
SKIV2L-216ENST00000628157 CYB5RLQ6IPT4 315 aa14.73□□□□□ -0.05
SKIV2L-216ENST00000628157 CEP164Q9UPV0 1460 aa14.72□□□□□ -0.05
SKIV2L-216ENST00000628157 ARHGEF11O15085 1522 aa14.7□□□□□ -0.06
SKIV2L-216ENST00000628157 PEG3Q9GZU2 1588 aa14.69□□□□□ -0.06
SKIV2L-216ENST00000628157 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
SKIV2L-216ENST00000628157 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
SKIV2L-216ENST00000628157 URB2Q14146 1524 aaKnown RBP14.55□□□□□ -0.08
SKIV2L-216ENST00000628157 ARAP1Q96P48 1450 aa14.52□□□□□ -0.08
SKIV2L-216ENST00000628157 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
SKIV2L-216ENST00000628157 FBLN2P98095 1184 aa14.48□□□□□ -0.09
SKIV2L-216ENST00000628157 WIZO95785 1651 aa14.45□□□□□ -0.1
SKIV2L-216ENST00000628157 CFTRP13569 1480 aa14.44□□□□□ -0.1
SKIV2L-216ENST00000628157 IFT140Q96RY7 1462 aa14.43□□□□□ -0.1
SKIV2L-216ENST00000628157 CHD1O14646 1710 aa14.36□□□□□ -0.11
SKIV2L-216ENST00000628157 EIF4G3O43432 1585 aaKnown RBP14.36□□□□□ -0.11
SKIV2L-216ENST00000628157 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
SKIV2L-216ENST00000628157 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.123e-8■■■■■ 35.4
SKIV2L-216ENST00000628157 ILDR1Q86SU0 546 aaPredicted RBP14.29□□□□□ -0.12
SKIV2L-216ENST00000628157 TOPBP1Q92547 1522 aa14.28□□□□□ -0.12
SKIV2L-216ENST00000628157 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
SKIV2L-216ENST00000628157 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
SKIV2L-216ENST00000628157 PRDM2Q13029 1718 aa14.16□□□□□ -0.14
SKIV2L-216ENST00000628157 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
SKIV2L-216ENST00000628157 SNAPC4Q5SXM2 1469 aa14.15□□□□□ -0.14
SKIV2L-216ENST00000628157 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
SKIV2L-216ENST00000628157 DNMBPQ6XZF7 1577 aa14.14□□□□□ -0.15
SKIV2L-216ENST00000628157 TARBP1Q13395 1621 aaKnown RBP14.14□□□□□ -0.15
SKIV2L-216ENST00000628157 GAPVD1Q14C86 1478 aa14.13□□□□□ -0.15
SKIV2L-216ENST00000628157 SYNJ1O43426 1573 aa14.13□□□□□ -0.15
SKIV2L-216ENST00000628157 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
SKIV2L-216ENST00000628157 RAD54L2Q9Y4B4 1467 aa14.12□□□□□ -0.15
SKIV2L-216ENST00000628157 POLA1P09884 1462 aaPredicted RBP14.09□□□□□ -0.15
SKIV2L-216ENST00000628157 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
SKIV2L-216ENST00000628157 SOGA1O94964 1423 aa14.04□□□□□ -0.16
SKIV2L-216ENST00000628157 MAGI1Q96QZ7 1491 aaPredicted RBP13.99□□□□□ -0.17
SKIV2L-216ENST00000628157 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
SKIV2L-216ENST00000628157 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
SKIV2L-216ENST00000628157 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
SKIV2L-216ENST00000628157 ERCC6L2Q5T890 1561 aa13.96□□□□□ -0.17
SKIV2L-216ENST00000628157 FGD5Q6ZNL6 1462 aa13.94□□□□□ -0.18
SKIV2L-216ENST00000628157 FAM69CQ0P6D2 419 aa13.92□□□□□ -0.18
SKIV2L-216ENST00000628157 KIF13AQ9H1H9 1805 aa13.89□□□□□ -0.19
SKIV2L-216ENST00000628157 WDR97A6NE52 1622 aa13.88□□□□□ -0.19
SKIV2L-216ENST00000628157 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
SKIV2L-216ENST00000628157 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
SKIV2L-216ENST00000628157 KDM6BO15054 1643 aa13.82□□□□□ -0.2
SKIV2L-216ENST00000628157 NPM1P06748 294 aaKnown RBP eCLIP13.8□□□□□ -0.2
SKIV2L-216ENST00000628157 CUX1P39880 1505 aa13.8□□□□□ -0.2
SKIV2L-216ENST00000628157 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
SKIV2L-216ENST00000628157 ABCC10Q5T3U5 1492 aa13.78□□□□□ -0.2
SKIV2L-216ENST00000628157 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
SKIV2L-216ENST00000628157 ADGRL1O94910 1474 aa13.74□□□□□ -0.21
SKIV2L-216ENST00000628157 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
SKIV2L-216ENST00000628157 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
SKIV2L-216ENST00000628157 TSPOAP1O95153 1857 aa13.73□□□□□ -0.21
SKIV2L-216ENST00000628157 NUP160Q12769 1436 aa13.73□□□□□ -0.21
SKIV2L-216ENST00000628157 ABCA5Q8WWZ7 1642 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms