RNA–Protein interactions for RNA: ENST00000627866.1

AL499606.1-201, humanhuman

TSL 3 BASIC

Gene AL499606.1, Length 413 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL499606.1-201ENST00000627866 AEBP2Q6ZN18 517 aaPredicted RBP36.46■■■■□ 3.43
AL499606.1-201ENST00000627866 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
AL499606.1-201ENST00000627866 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
AL499606.1-201ENST00000627866 SENP3Q9H4L4 574 aaPredicted RBP31.08■■■□□ 2.57
AL499606.1-201ENST00000627866 PHF23Q9BUL5 403 aaPredicted RBP30.69■■■□□ 2.5
AL499606.1-201ENST00000627866 FOXD1Q16676 465 aa28.96■■■□□ 2.23
AL499606.1-201ENST00000627866 ABCC9O60706 1549 aa28.69■■■□□ 2.18
AL499606.1-201ENST00000627866 CCDC180Q9P1Z9 1646 aa28.23■■■□□ 2.11
AL499606.1-201ENST00000627866 PLPPR3Q6T4P5 718 aa27.7■■■□□ 2.02
AL499606.1-201ENST00000627866 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
AL499606.1-201ENST00000627866 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
AL499606.1-201ENST00000627866 PPP6R1Q9UPN7 881 aa27.13■■□□□ 1.93
AL499606.1-201ENST00000627866 MSH5O43196 834 aa27.09■■□□□ 1.93
AL499606.1-201ENST00000627866 PIAS4Q8N2W9 510 aaPredicted RBP27.05■■□□□ 1.92
AL499606.1-201ENST00000627866 ADRA2BP18089 450 aa27.02■■□□□ 1.92
AL499606.1-201ENST00000627866 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
AL499606.1-201ENST00000627866 NACADO15069 1562 aa26.87■■□□□ 1.89
AL499606.1-201ENST00000627866 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
AL499606.1-201ENST00000627866 MYO15BQ96JP2 1530 aa26.39■■□□□ 1.81
AL499606.1-201ENST00000627866 POTEDQ86YR6 584 aa26.37■■□□□ 1.81
AL499606.1-201ENST00000627866 UNC13AQ9UPW8 1703 aa26.25■■□□□ 1.79
AL499606.1-201ENST00000627866 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
AL499606.1-201ENST00000627866 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
AL499606.1-201ENST00000627866 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
AL499606.1-201ENST00000627866 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
AL499606.1-201ENST00000627866 CECR2Q9BXF3 1484 aa25.89■■□□□ 1.73
AL499606.1-201ENST00000627866 CC2D2AQ9P2K1 1620 aa25.81■■□□□ 1.72
AL499606.1-201ENST00000627866 SCRIBQ14160 1630 aa25.8■■□□□ 1.72
AL499606.1-201ENST00000627866 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
AL499606.1-201ENST00000627866 DNAJC5Q9H3Z4 198 aa25.22■■□□□ 1.63
AL499606.1-201ENST00000627866 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
AL499606.1-201ENST00000627866 NCAPD3P42695 1498 aa24.84■■□□□ 1.57
AL499606.1-201ENST00000627866 CUX2O14529 1486 aa24.83■■□□□ 1.57
AL499606.1-201ENST00000627866 MAPK8IP2Q13387 824 aaPredicted RBP24.82■■□□□ 1.56
AL499606.1-201ENST00000627866 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
AL499606.1-201ENST00000627866 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
AL499606.1-201ENST00000627866 DMRT2Q9Y5R5 561 aa24.66■■□□□ 1.54
AL499606.1-201ENST00000627866 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
AL499606.1-201ENST00000627866 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
AL499606.1-201ENST00000627866 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
AL499606.1-201ENST00000627866 NESP48681 1621 aa24.51■■□□□ 1.51
AL499606.1-201ENST00000627866 BAZ1BQ9UIG0 1483 aaKnown RBP24.51■■□□□ 1.51
AL499606.1-201ENST00000627866 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
AL499606.1-201ENST00000627866 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
AL499606.1-201ENST00000627866 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
AL499606.1-201ENST00000627866 PPP4R3CPQ6ZMV5 832 aa24.29■■□□□ 1.48
AL499606.1-201ENST00000627866 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
AL499606.1-201ENST00000627866 MROH2BQ7Z745 1585 aa24.22■■□□□ 1.47
AL499606.1-201ENST00000627866 THOC2Q8NI27 1593 aaKnown RBP24.22■■□□□ 1.47
AL499606.1-201ENST00000627866 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
AL499606.1-201ENST00000627866 TRIM41Q8WV44 630 aa24.1■■□□□ 1.45
AL499606.1-201ENST00000627866 KIF21AQ7Z4S6 1674 aa24.05■■□□□ 1.44
AL499606.1-201ENST00000627866 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
AL499606.1-201ENST00000627866 WDR62O43379 1518 aa23.89■■□□□ 1.42
AL499606.1-201ENST00000627866 CEP164Q9UPV0 1460 aa23.89■■□□□ 1.42
AL499606.1-201ENST00000627866 WIZO95785 1651 aa23.86■■□□□ 1.41
AL499606.1-201ENST00000627866 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
AL499606.1-201ENST00000627866 CNKSR2Q8WXI2 1034 aa23.82■■□□□ 1.4
AL499606.1-201ENST00000627866 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
AL499606.1-201ENST00000627866 HOXD11P31277 338 aaPredicted RBP23.78■■□□□ 1.4
AL499606.1-201ENST00000627866 CFTRP13569 1480 aa23.74■■□□□ 1.39
AL499606.1-201ENST00000627866 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
AL499606.1-201ENST00000627866 RNF216Q9NWF9 866 aaPredicted RBP23.61■■□□□ 1.37
AL499606.1-201ENST00000627866 TOP2AP11388 1531 aaKnown RBP23.59■■□□□ 1.37
AL499606.1-201ENST00000627866 DCAF8L1A6NGE4 600 aa23.59■■□□□ 1.37
AL499606.1-201ENST00000627866 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
AL499606.1-201ENST00000627866 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
AL499606.1-201ENST00000627866 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
AL499606.1-201ENST00000627866 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
AL499606.1-201ENST00000627866 ZNF608Q9ULD9 1512 aaPredicted RBP23.36■■□□□ 1.33
AL499606.1-201ENST00000627866 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
AL499606.1-201ENST00000627866 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
AL499606.1-201ENST00000627866 RIMBP3CA6NJZ7 1639 aa23.29■■□□□ 1.32
AL499606.1-201ENST00000627866 RIMBP3BA6NNM3 1639 aa23.29■■□□□ 1.32
AL499606.1-201ENST00000627866 RIMBP3Q9UFD9 1639 aa23.29■■□□□ 1.32
AL499606.1-201ENST00000627866 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
AL499606.1-201ENST00000627866 ARHGEF11O15085 1522 aa23.25■■□□□ 1.31
AL499606.1-201ENST00000627866 FBLN2P98095 1184 aa23.25■■□□□ 1.31
AL499606.1-201ENST00000627866 PRDM2Q13029 1718 aa23.22■■□□□ 1.31
AL499606.1-201ENST00000627866 CACNB1Q02641 598 aaPredicted RBP23.2■■□□□ 1.3
AL499606.1-201ENST00000627866 AQRO60306 1485 aaKnown RBP eCLIP23.17■■□□□ 1.3
AL499606.1-201ENST00000627866 TRHP20396 242 aaPredicted RBP23.17■■□□□ 1.3
AL499606.1-201ENST00000627866 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
AL499606.1-201ENST00000627866 EIF4G3O43432 1585 aaKnown RBP23.16■■□□□ 1.3
AL499606.1-201ENST00000627866 RNF39Q9H2S5 420 aa23.13■■□□□ 1.29
AL499606.1-201ENST00000627866 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
AL499606.1-201ENST00000627866 SOGA1O94964 1423 aa23.04■■□□□ 1.28
AL499606.1-201ENST00000627866 NPM3O75607 178 aaKnown RBP23.03■■□□□ 1.28
AL499606.1-201ENST00000627866 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
AL499606.1-201ENST00000627866 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
AL499606.1-201ENST00000627866 CHMP7Q8WUX9 453 aaPredicted RBP23■■□□□ 1.27
AL499606.1-201ENST00000627866 ARAP1Q96P48 1450 aa22.99■■□□□ 1.27
AL499606.1-201ENST00000627866 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
AL499606.1-201ENST00000627866 CHD1O14646 1710 aa22.96■■□□□ 1.27
AL499606.1-201ENST00000627866 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
AL499606.1-201ENST00000627866 FGD5Q6ZNL6 1462 aa22.87■■□□□ 1.25
AL499606.1-201ENST00000627866 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
AL499606.1-201ENST00000627866 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
AL499606.1-201ENST00000627866 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
AL499606.1-201ENST00000627866 SYNJ1O43426 1573 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms