RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
AC002540.1-201ENST00000625023 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
AC002540.1-201ENST00000625023 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
AC002540.1-201ENST00000625023 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
AC002540.1-201ENST00000625023 ABCC9O60706 1549 aa18.38■□□□□ 0.53
AC002540.1-201ENST00000625023 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
AC002540.1-201ENST00000625023 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
AC002540.1-201ENST00000625023 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
AC002540.1-201ENST00000625023 NACADO15069 1562 aa17.64■□□□□ 0.42
AC002540.1-201ENST00000625023 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.4
AC002540.1-201ENST00000625023 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
AC002540.1-201ENST00000625023 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
AC002540.1-201ENST00000625023 DCAF8L2P0C7V8 631 aa17.42■□□□□ 0.38
AC002540.1-201ENST00000625023 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
AC002540.1-201ENST00000625023 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
AC002540.1-201ENST00000625023 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
AC002540.1-201ENST00000625023 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
AC002540.1-201ENST00000625023 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
AC002540.1-201ENST00000625023 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
AC002540.1-201ENST00000625023 FOXD1Q16676 465 aa16.92■□□□□ 0.3
AC002540.1-201ENST00000625023 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
AC002540.1-201ENST00000625023 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
AC002540.1-201ENST00000625023 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
AC002540.1-201ENST00000625023 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
AC002540.1-201ENST00000625023 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
AC002540.1-201ENST00000625023 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
AC002540.1-201ENST00000625023 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
AC002540.1-201ENST00000625023 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
AC002540.1-201ENST00000625023 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
AC002540.1-201ENST00000625023 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
AC002540.1-201ENST00000625023 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
AC002540.1-201ENST00000625023 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
AC002540.1-201ENST00000625023 MSH5O43196 834 aa16.1■□□□□ 0.17
AC002540.1-201ENST00000625023 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
AC002540.1-201ENST00000625023 WIZO95785 1651 aa16■□□□□ 0.15
AC002540.1-201ENST00000625023 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
AC002540.1-201ENST00000625023 NESP48681 1621 aa15.91■□□□□ 0.14
AC002540.1-201ENST00000625023 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
AC002540.1-201ENST00000625023 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
AC002540.1-201ENST00000625023 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
AC002540.1-201ENST00000625023 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
AC002540.1-201ENST00000625023 CUX2O14529 1486 aa15.77■□□□□ 0.12
AC002540.1-201ENST00000625023 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
AC002540.1-201ENST00000625023 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
AC002540.1-201ENST00000625023 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
AC002540.1-201ENST00000625023 KIF21AQ7Z4S6 1674 aa15.71■□□□□ 0.11
AC002540.1-201ENST00000625023 CFTRP13569 1480 aa15.7■□□□□ 0.1
AC002540.1-201ENST00000625023 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
AC002540.1-201ENST00000625023 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
AC002540.1-201ENST00000625023 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
AC002540.1-201ENST00000625023 WDR62O43379 1518 aa15.58■□□□□ 0.08
AC002540.1-201ENST00000625023 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
AC002540.1-201ENST00000625023 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
AC002540.1-201ENST00000625023 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
AC002540.1-201ENST00000625023 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
AC002540.1-201ENST00000625023 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
AC002540.1-201ENST00000625023 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
AC002540.1-201ENST00000625023 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
AC002540.1-201ENST00000625023 ADRA2BP18089 450 aa15.34■□□□□ 0.05
AC002540.1-201ENST00000625023 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
AC002540.1-201ENST00000625023 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
AC002540.1-201ENST00000625023 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
AC002540.1-201ENST00000625023 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
AC002540.1-201ENST00000625023 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
AC002540.1-201ENST00000625023 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
AC002540.1-201ENST00000625023 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.03
AC002540.1-201ENST00000625023 CUX1P39880 1505 aa15.2■□□□□ 0.02
AC002540.1-201ENST00000625023 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
AC002540.1-201ENST00000625023 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
AC002540.1-201ENST00000625023 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
AC002540.1-201ENST00000625023 SOGA1O94964 1423 aa15.11■□□□□ 0.01
AC002540.1-201ENST00000625023 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
AC002540.1-201ENST00000625023 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
AC002540.1-201ENST00000625023 OSCARQ8IYS5 282 aa15.04■□□□□ -0
AC002540.1-201ENST00000625023 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
AC002540.1-201ENST00000625023 TDRD9Q8NDG6 1382 aaKnown RBP15.03■□□□□ -0
AC002540.1-201ENST00000625023 TOP2BQ02880 1626 aa15.03■□□□□ -0
AC002540.1-201ENST00000625023 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
AC002540.1-201ENST00000625023 SYNJ1O43426 1573 aa15.02□□□□□ -0.01
AC002540.1-201ENST00000625023 WRNQ14191 1432 aaPredicted RBP eCLIP15.02□□□□□ -0.01
AC002540.1-201ENST00000625023 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
AC002540.1-201ENST00000625023 CHD1O14646 1710 aa14.96□□□□□ -0.01
AC002540.1-201ENST00000625023 GRIN2BQ13224 1484 aa14.96□□□□□ -0.02
AC002540.1-201ENST00000625023 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
AC002540.1-201ENST00000625023 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
AC002540.1-201ENST00000625023 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
AC002540.1-201ENST00000625023 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
AC002540.1-201ENST00000625023 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
AC002540.1-201ENST00000625023 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
AC002540.1-201ENST00000625023 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
AC002540.1-201ENST00000625023 FBLN2P98095 1184 aa14.81□□□□□ -0.04
AC002540.1-201ENST00000625023 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
AC002540.1-201ENST00000625023 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
AC002540.1-201ENST00000625023 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
AC002540.1-201ENST00000625023 FHAD1B1AJZ9 1412 aa14.77□□□□□ -0.04
AC002540.1-201ENST00000625023 NUP160Q12769 1436 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms