RNA–Protein interactions for RNA: ENST00000623217.1

CR392039.1-201, humanhuman

BASIC

Gene CR392039.1, Length 204 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR392039.1-201ENST00000623217 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
CR392039.1-201ENST00000623217 ABCC9O60706 1549 aa29.87■■■□□ 2.37
CR392039.1-201ENST00000623217 CCDC180Q9P1Z9 1646 aa29.41■■■□□ 2.3
CR392039.1-201ENST00000623217 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
CR392039.1-201ENST00000623217 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
CR392039.1-201ENST00000623217 NACADO15069 1562 aa27.9■■■□□ 2.06
CR392039.1-201ENST00000623217 UNC13AQ9UPW8 1703 aa27.76■■■□□ 2.03
CR392039.1-201ENST00000623217 PABPN1Q86U42 306 aaKnown RBP eCLIP27.66■■■□□ 2.02
CR392039.1-201ENST00000623217 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
CR392039.1-201ENST00000623217 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
CR392039.1-201ENST00000623217 DCAF8L2P0C7V8 631 aa27.35■■□□□ 1.97
CR392039.1-201ENST00000623217 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
CR392039.1-201ENST00000623217 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
CR392039.1-201ENST00000623217 CECR2Q9BXF3 1484 aa27■■□□□ 1.91
CR392039.1-201ENST00000623217 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
CR392039.1-201ENST00000623217 DNAJC5Q9H3Z4 198 aa26.8■■□□□ 1.88
CR392039.1-201ENST00000623217 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
CR392039.1-201ENST00000623217 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
CR392039.1-201ENST00000623217 SCRIBQ14160 1630 aa26.62■■□□□ 1.85
CR392039.1-201ENST00000623217 CUX2O14529 1486 aa26.08■■□□□ 1.77
CR392039.1-201ENST00000623217 ERCC6Q03468 1493 aa25.78■■□□□ 1.72
CR392039.1-201ENST00000623217 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
CR392039.1-201ENST00000623217 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
CR392039.1-201ENST00000623217 NESP48681 1621 aa25.53■■□□□ 1.68
CR392039.1-201ENST00000623217 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
CR392039.1-201ENST00000623217 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
CR392039.1-201ENST00000623217 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
CR392039.1-201ENST00000623217 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
CR392039.1-201ENST00000623217 LAMC3Q9Y6N6 1575 aa25.29■■□□□ 1.64
CR392039.1-201ENST00000623217 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
CR392039.1-201ENST00000623217 PEG3Q9GZU2 1588 aa25.23■■□□□ 1.63
CR392039.1-201ENST00000623217 BAZ1BQ9UIG0 1483 aaKnown RBP25.22■■□□□ 1.63
CR392039.1-201ENST00000623217 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
CR392039.1-201ENST00000623217 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
CR392039.1-201ENST00000623217 PDS5BQ9NTI5 1447 aa25.08■■□□□ 1.61
CR392039.1-201ENST00000623217 WDR62O43379 1518 aa24.95■■□□□ 1.58
CR392039.1-201ENST00000623217 MROH2BQ7Z745 1585 aa24.93■■□□□ 1.58
CR392039.1-201ENST00000623217 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
CR392039.1-201ENST00000623217 CADPSQ9ULU8 1353 aa24.9■■□□□ 1.58
CR392039.1-201ENST00000623217 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
CR392039.1-201ENST00000623217 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
CR392039.1-201ENST00000623217 WIZO95785 1651 aa24.62■■□□□ 1.53
CR392039.1-201ENST00000623217 FANCD2Q9BXW9 1451 aa24.6■■□□□ 1.53
CR392039.1-201ENST00000623217 RIMBP3CA6NJZ7 1639 aa24.56■■□□□ 1.52
CR392039.1-201ENST00000623217 RIMBP3BA6NNM3 1639 aa24.56■■□□□ 1.52
CR392039.1-201ENST00000623217 RIMBP3Q9UFD9 1639 aa24.56■■□□□ 1.52
CR392039.1-201ENST00000623217 CFTRP13569 1480 aa24.52■■□□□ 1.52
CR392039.1-201ENST00000623217 URB2Q14146 1524 aaKnown RBP24.49■■□□□ 1.51
CR392039.1-201ENST00000623217 ARHGEF11O15085 1522 aa24.38■■□□□ 1.49
CR392039.1-201ENST00000623217 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
CR392039.1-201ENST00000623217 ZNF608Q9ULD9 1512 aaPredicted RBP24.27■■□□□ 1.48
CR392039.1-201ENST00000623217 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
CR392039.1-201ENST00000623217 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
CR392039.1-201ENST00000623217 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
CR392039.1-201ENST00000623217 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
CR392039.1-201ENST00000623217 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
CR392039.1-201ENST00000623217 CHD1O14646 1710 aa24.12■■□□□ 1.45
CR392039.1-201ENST00000623217 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
CR392039.1-201ENST00000623217 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
CR392039.1-201ENST00000623217 TARBP1Q13395 1621 aaKnown RBP24.01■■□□□ 1.43
CR392039.1-201ENST00000623217 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
CR392039.1-201ENST00000623217 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
CR392039.1-201ENST00000623217 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
CR392039.1-201ENST00000623217 CCDC88BA6NC98 1476 aa23.95■■□□□ 1.42
CR392039.1-201ENST00000623217 AQRO60306 1485 aaKnown RBP eCLIP23.94■■□□□ 1.42
CR392039.1-201ENST00000623217 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
CR392039.1-201ENST00000623217 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
CR392039.1-201ENST00000623217 FBLN2P98095 1184 aa23.77■■□□□ 1.4
CR392039.1-201ENST00000623217 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
CR392039.1-201ENST00000623217 WDR97A6NE52 1622 aa23.7■■□□□ 1.39
CR392039.1-201ENST00000623217 RAD54L2Q9Y4B4 1467 aa23.7■■□□□ 1.38
CR392039.1-201ENST00000623217 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
CR392039.1-201ENST00000623217 SNAPC4Q5SXM2 1469 aa23.67■■□□□ 1.38
CR392039.1-201ENST00000623217 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
CR392039.1-201ENST00000623217 SOGA1O94964 1423 aa23.64■■□□□ 1.37
CR392039.1-201ENST00000623217 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
CR392039.1-201ENST00000623217 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
CR392039.1-201ENST00000623217 SYNJ2O15056 1496 aa23.54■■□□□ 1.36
CR392039.1-201ENST00000623217 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
CR392039.1-201ENST00000623217 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
CR392039.1-201ENST00000623217 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
CR392039.1-201ENST00000623217 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
CR392039.1-201ENST00000623217 CUX1P39880 1505 aa23.45■■□□□ 1.34
CR392039.1-201ENST00000623217 ERCC6L2Q5T890 1561 aa23.38■■□□□ 1.33
CR392039.1-201ENST00000623217 KIF13AQ9H1H9 1805 aa23.36■■□□□ 1.33
CR392039.1-201ENST00000623217 ABCA5Q8WWZ7 1642 aa23.34■■□□□ 1.33
CR392039.1-201ENST00000623217 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
CR392039.1-201ENST00000623217 CEP170Q5SW79 1584 aa23.27■■□□□ 1.32
CR392039.1-201ENST00000623217 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
CR392039.1-201ENST00000623217 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
CR392039.1-201ENST00000623217 NUP160Q12769 1436 aa23.22■■□□□ 1.31
CR392039.1-201ENST00000623217 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
CR392039.1-201ENST00000623217 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
CR392039.1-201ENST00000623217 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
CR392039.1-201ENST00000623217 KDM4FA0A1W2PPD8 638 aa22.98■■□□□ 1.27
CR392039.1-201ENST00000623217 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
CR392039.1-201ENST00000623217 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
CR392039.1-201ENST00000623217 DIP2BQ9P265 1576 aa22.97■■□□□ 1.27
CR392039.1-201ENST00000623217 PRG4Q92954 1404 aaPredicted RBP22.97■■□□□ 1.27
CR392039.1-201ENST00000623217 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms