RNA–Protein interactions for RNA: ENST00000621976.1

KCNQ3-205, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNQ3, Length 10,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-205ENST00000621976 MYT1Q01538 1121 aa11.11□□□□□ -0.63
KCNQ3-205ENST00000621976 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
KCNQ3-205ENST00000621976 TTBK1Q5TCY1 1321 aaPredicted RBP10.34□□□□□ -0.75
KCNQ3-205ENST00000621976 CCER1Q8TC90 406 aaPredicted RBP10.27□□□□□ -0.77
KCNQ3-205ENST00000621976 ERICH6Q7L0X2 663 aa10.2□□□□□ -0.78
KCNQ3-205ENST00000621976 YTHDC1Q96MU7 727 aaKnown RBP10.16□□□□□ -0.78
KCNQ3-205ENST00000621976 CENPBP07199 599 aaPredicted RBP10.1□□□□□ -0.79
KCNQ3-205ENST00000621976 ZEB1P37275 1124 aaPredicted RBP9.86□□□□□ -0.83
KCNQ3-205ENST00000621976 NEFLP07196 543 aa9.76□□□□□ -0.85
KCNQ3-205ENST00000621976 GLIPR1L2Q4G1C9 344 aa9.61□□□□□ -0.87
KCNQ3-205ENST00000621976 DAXXQ9UER7 740 aaPredicted RBP9.6□□□□□ -0.87
KCNQ3-205ENST00000621976 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
KCNQ3-205ENST00000621976 DCAF8L2P0C7V8 631 aa9.54□□□□□ -0.88
KCNQ3-205ENST00000621976 APLP2Q06481 763 aa9.46□□□□□ -0.9
KCNQ3-205ENST00000621976 RANGAP1P46060 587 aaPredicted RBP9.45□□□□□ -0.9
KCNQ3-205ENST00000621976 MYT1LQ9UL68 1186 aa9.44□□□□□ -0.9
KCNQ3-205ENST00000621976 PCGF6Q9BYE7 350 aa9.42□□□□□ -0.9
KCNQ3-205ENST00000621976 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
KCNQ3-205ENST00000621976 FAM9AQ8IZU1 332 aaPredicted RBP9.31□□□□□ -0.92
KCNQ3-205ENST00000621976 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
KCNQ3-205ENST00000621976 CLSPNQ9HAW4 1339 aa9.26□□□□□ -0.93
KCNQ3-205ENST00000621976 HRCP23327 699 aa9.26□□□□□ -0.93
KCNQ3-205ENST00000621976 EIF5BO60841 1220 aaKnown RBP9.17□□□□□ -0.94
KCNQ3-205ENST00000621976 TNNT2P45379 298 aaPredicted RBP9.09□□□□□ -0.95
KCNQ3-205ENST00000621976 ANP32BQ92688 251 aaKnown RBP9.08□□□□□ -0.96
KCNQ3-205ENST00000621976 CDK11AQ9UQ88 783 aaPredicted RBP9.06□□□□□ -0.96
KCNQ3-205ENST00000621976 TRIM26Q12899 539 aaPredicted RBP9.06□□□□□ -0.96
KCNQ3-205ENST00000621976 ANP32AP39687 249 aaKnown RBP9.05□□□□□ -0.96
KCNQ3-205ENST00000621976 EHMT2Q96KQ7 1210 aa9.03□□□□□ -0.96
KCNQ3-205ENST00000621976 NCLP19338 710 aaKnown RBP9.02□□□□□ -0.97
KCNQ3-205ENST00000621976 GTF3C3Q9Y5Q9 886 aa8.99□□□□□ -0.97
KCNQ3-205ENST00000621976 DIEXFQ68CQ4 756 aaKnown RBP8.96□□□□□ -0.98
KCNQ3-205ENST00000621976 TRIM44Q96DX7 344 aaPredicted RBP8.95□□□□□ -0.98
KCNQ3-205ENST00000621976 SHROOM4Q9ULL8 1493 aa8.94□□□□□ -0.98
KCNQ3-205ENST00000621976 CDK11BP21127 795 aaKnown RBP8.93□□□□□ -0.98
KCNQ3-205ENST00000621976 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
KCNQ3-205ENST00000621976 ACIN1Q9UKV3 1341 aaKnown RBP8.91□□□□□ -0.98
KCNQ3-205ENST00000621976 POLR3GLQ9BT43 218 aa8.89□□□□□ -0.99
KCNQ3-205ENST00000621976 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
KCNQ3-205ENST00000621976 ANP32EQ9BTT0 268 aa8.83□□□□□ -1
KCNQ3-205ENST00000621976 ERICH6BQ5W0A0 696 aa8.83□□□□□ -1
KCNQ3-205ENST00000621976 NISCHQ9Y2I1 1504 aa8.79□□□□□ -1
KCNQ3-205ENST00000621976 ZNF326Q5BKZ1 582 aaKnown RBP8.78□□□□□ -1
KCNQ3-205ENST00000621976 ZBTB47Q9UFB7 747 aaPredicted RBP8.75□□□□□ -1.01
KCNQ3-205ENST00000621976 PTMSP20962 102 aa8.75□□□□□ -1.01
KCNQ3-205ENST00000621976 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
KCNQ3-205ENST00000621976 TRIM41Q8WV44 630 aa8.72□□□□□ -1.01
KCNQ3-205ENST00000621976 UBTFP17480 764 aaKnown RBP8.72□□□□□ -1.01
KCNQ3-205ENST00000621976 BCANQ96GW7 911 aa8.72□□□□□ -1.01
KCNQ3-205ENST00000621976 NEFMP07197 916 aa8.7□□□□□ -1.02
KCNQ3-205ENST00000621976 ATP1B4Q9UN42 357 aaPredicted RBP8.69□□□□□ -1.02
KCNQ3-205ENST00000621976 HSP90AA1P07900 732 aaKnown RBP8.69□□□□□ -1.02
KCNQ3-205ENST00000621976 ANP32CO43423 234 aa8.69□□□□□ -1.02
KCNQ3-205ENST00000621976 DDRGK1Q96HY6 314 aa8.67□□□□□ -1.02
KCNQ3-205ENST00000621976 NBR1Q14596 966 aa8.66□□□□□ -1.02
KCNQ3-205ENST00000621976 NAP1L5Q96NT1 182 aaPredicted RBP8.66□□□□□ -1.02
KCNQ3-205ENST00000621976 PPARGC1BQ86YN6 1023 aaKnown RBP8.65□□□□□ -1.02
KCNQ3-205ENST00000621976 CALRP27797 417 aaKnown RBP8.61□□□□□ -1.03
KCNQ3-205ENST00000621976 CANXP27824 592 aaKnown RBP8.61□□□□□ -1.03
KCNQ3-205ENST00000621976 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
KCNQ3-205ENST00000621976 BECN1Q14457 450 aa8.6□□□□□ -1.03
KCNQ3-205ENST00000621976 PPM1GO15355 546 aaPredicted RBP8.58□□□□□ -1.04
KCNQ3-205ENST00000621976 GOLGA6L22H0YM25 854 aa8.57□□□□□ -1.04
KCNQ3-205ENST00000621976 CHAF1AQ13111 956 aaPredicted RBP8.57□□□□□ -1.04
KCNQ3-205ENST00000621976 CNGB1Q14028 1251 aaPredicted RBP8.57□□□□□ -1.04
KCNQ3-205ENST00000621976 SCAF1Q9H7N4 1312 aaKnown RBP8.57□□□□□ -1.04
KCNQ3-205ENST00000621976 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
KCNQ3-205ENST00000621976 CCDC180Q9P1Z9 1646 aa8.54□□□□□ -1.04
KCNQ3-205ENST00000621976 L1TD1Q5T7N2 865 aaKnown RBP8.54□□□□□ -1.04
KCNQ3-205ENST00000621976 ARID4BQ4LE39 1312 aaPredicted RBP8.54□□□□□ -1.04
KCNQ3-205ENST00000621976 TNNT3P45378 269 aaPredicted RBP8.53□□□□□ -1.04
KCNQ3-205ENST00000621976 PTMAP06454 111 aaKnown RBP8.51□□□□□ -1.05
KCNQ3-205ENST00000621976 FKBP8Q14318 412 aa8.51□□□□□ -1.05
KCNQ3-205ENST00000621976 SLC4A1APQ9BWU0 796 aaKnown RBP8.51□□□□□ -1.05
KCNQ3-205ENST00000621976 GOLGA6L6A8MZA4 724 aa8.5□□□□□ -1.05
KCNQ3-205ENST00000621976 DNTTIP2Q5QJE6 756 aaKnown RBP8.5□□□□□ -1.05
KCNQ3-205ENST00000621976 A0A0U1RQG5 324 aaPredicted RBP8.49□□□□□ -1.05
KCNQ3-205ENST00000621976 LAS1LQ9Y4W2 734 aaKnown RBP8.49□□□□□ -1.05
KCNQ3-205ENST00000621976 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.48□□□□□ -1.05
KCNQ3-205ENST00000621976 NRDCO43847 1150 aa8.47□□□□□ -1.05
KCNQ3-205ENST00000621976 NOP58Q9Y2X3 529 aaKnown RBP8.47□□□□□ -1.05
KCNQ3-205ENST00000621976 DCAF1Q9Y4B6 1507 aa8.46□□□□□ -1.05
KCNQ3-205ENST00000621976 CCDC136Q96JN2 1154 aa8.46□□□□□ -1.05
KCNQ3-205ENST00000621976 DEKP35659 375 aaKnown RBP8.46□□□□□ -1.05
KCNQ3-205ENST00000621976 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.46□□□□□ -1.06
KCNQ3-205ENST00000621976 MSNP26038 577 aaKnown RBP8.44□□□□□ -1.06
KCNQ3-205ENST00000621976 HSP90AA2PQ14568 343 aaPredicted RBP8.44□□□□□ -1.06
KCNQ3-205ENST00000621976 SETQ01105 290 aaPredicted RBP8.44□□□□□ -1.06
KCNQ3-205ENST00000621976 USP35Q9P2H5 1018 aa8.43□□□□□ -1.06
KCNQ3-205ENST00000621976 PODXL2Q9NZ53 605 aa8.43□□□□□ -1.06
KCNQ3-205ENST00000621976 ARXQ96QS3 562 aa8.43□□□□□ -1.06
KCNQ3-205ENST00000621976 NEUROD1Q13562 356 aa8.42□□□□□ -1.06
KCNQ3-205ENST00000621976 PKNOX2Q96KN3 472 aa8.42□□□□□ -1.06
KCNQ3-205ENST00000621976 HNRNPUL2Q1KMD3 747 aaKnown RBP8.41□□□□□ -1.06
KCNQ3-205ENST00000621976 PNNQ9H307 717 aaKnown RBP8.41□□□□□ -1.06
KCNQ3-205ENST00000621976 ITGAEP38570 1179 aa8.41□□□□□ -1.06
KCNQ3-205ENST00000621976 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
KCNQ3-205ENST00000621976 APPP05067 770 aa8.39□□□□□ -1.07
KCNQ3-205ENST00000621976 ZRSR1Q15695 479 aaKnown RBP8.38□□□□□ -1.07
KCNQ3-205ENST00000621976 AMER1Q5JTC6 1135 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms