RNA–Protein interactions for RNA: ENST00000618363.4

SHANK2-221, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-221ENST00000618363 NISCHQ9Y2I1 1504 aa28.53■■■□□ 2.16
SHANK2-221ENST00000618363 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
SHANK2-221ENST00000618363 ABCC9O60706 1549 aa25.22■■□□□ 1.63
SHANK2-221ENST00000618363 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
SHANK2-221ENST00000618363 RB1CC1Q8TDY2 1594 aa24.16■■□□□ 1.46
SHANK2-221ENST00000618363 NACADO15069 1562 aa24.05■■□□□ 1.44
SHANK2-221ENST00000618363 MYO15BQ96JP2 1530 aa23.78■■□□□ 1.4
SHANK2-221ENST00000618363 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
SHANK2-221ENST00000618363 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
SHANK2-221ENST00000618363 DCAF1Q9Y4B6 1507 aa23.57■■□□□ 1.36
SHANK2-221ENST00000618363 UNC13AQ9UPW8 1703 aa23.5■■□□□ 1.35
SHANK2-221ENST00000618363 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
SHANK2-221ENST00000618363 DNAJC5BQ9UF47 199 aa23.33■■□□□ 1.33
SHANK2-221ENST00000618363 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
SHANK2-221ENST00000618363 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
SHANK2-221ENST00000618363 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
SHANK2-221ENST00000618363 SHROOM4Q9ULL8 1493 aa23.13■■□□□ 1.29
SHANK2-221ENST00000618363 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
SHANK2-221ENST00000618363 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
SHANK2-221ENST00000618363 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
SHANK2-221ENST00000618363 SMARCA4P51532 1647 aa22.18■■□□□ 1.14
SHANK2-221ENST00000618363 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
SHANK2-221ENST00000618363 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
SHANK2-221ENST00000618363 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
SHANK2-221ENST00000618363 SMARCA2P51531 1590 aa22.14■■□□□ 1.13
SHANK2-221ENST00000618363 HMGXB3Q12766 1538 aa22.02■■□□□ 1.12
SHANK2-221ENST00000618363 BAZ1BQ9UIG0 1483 aaKnown RBP22■■□□□ 1.11
SHANK2-221ENST00000618363 MROH2BQ7Z745 1585 aa21.96■■□□□ 1.11
SHANK2-221ENST00000618363 PEG3Q9GZU2 1588 aa21.93■■□□□ 1.1
SHANK2-221ENST00000618363 ERCC6Q03468 1493 aa21.84■■□□□ 1.09
SHANK2-221ENST00000618363 WIZO95785 1651 aa21.72■■□□□ 1.07
SHANK2-221ENST00000618363 NESP48681 1621 aa21.7■■□□□ 1.06
SHANK2-221ENST00000618363 LAMC3Q9Y6N6 1575 aa21.65■■□□□ 1.06
SHANK2-221ENST00000618363 CUX2O14529 1486 aa21.64■■□□□ 1.05
SHANK2-221ENST00000618363 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
SHANK2-221ENST00000618363 PDS5BQ9NTI5 1447 aa21.58■■□□□ 1.05
SHANK2-221ENST00000618363 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
SHANK2-221ENST00000618363 TOP2AP11388 1531 aaKnown RBP21.49■■□□□ 1.03
SHANK2-221ENST00000618363 KIF21AQ7Z4S6 1674 aa21.43■■□□□ 1.02
SHANK2-221ENST00000618363 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
SHANK2-221ENST00000618363 CFTRP13569 1480 aa21.32■■□□□ 1
SHANK2-221ENST00000618363 MRC2Q9UBG0 1479 aa21.32■■□□□ 1
SHANK2-221ENST00000618363 CEP164Q9UPV0 1460 aa21.32■■□□□ 1
SHANK2-221ENST00000618363 DNAJC5Q9H3Z4 198 aa21.3■■□□□ 1
SHANK2-221ENST00000618363 FANCD2Q9BXW9 1451 aa21.3■■□□□ 1
SHANK2-221ENST00000618363 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
SHANK2-221ENST00000618363 WDR62O43379 1518 aa21.21■□□□□ 0.99
SHANK2-221ENST00000618363 PRDM2Q13029 1718 aa21.12■□□□□ 0.97
SHANK2-221ENST00000618363 URB2Q14146 1524 aaKnown RBP21.04■□□□□ 0.96
SHANK2-221ENST00000618363 SUPT5HO00267 1087 aaKnown RBP21.04■□□□□ 0.96
SHANK2-221ENST00000618363 ABCC8Q09428 1581 aa20.96■□□□□ 0.95
SHANK2-221ENST00000618363 TOPBP1Q92547 1522 aa20.9■□□□□ 0.94
SHANK2-221ENST00000618363 IFT140Q96RY7 1462 aa20.88■□□□□ 0.93
SHANK2-221ENST00000618363 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
SHANK2-221ENST00000618363 OSCARQ8IYS5 282 aa20.78■□□□□ 0.92
SHANK2-221ENST00000618363 ZNF608Q9ULD9 1512 aaPredicted RBP20.74■□□□□ 0.91
SHANK2-221ENST00000618363 POLA1P09884 1462 aaPredicted RBP20.7■□□□□ 0.9
SHANK2-221ENST00000618363 SOGA1O94964 1423 aa20.69■□□□□ 0.9
SHANK2-221ENST00000618363 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
SHANK2-221ENST00000618363 TARBP1Q13395 1621 aaKnown RBP20.64■□□□□ 0.9
SHANK2-221ENST00000618363 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.89
SHANK2-221ENST00000618363 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
SHANK2-221ENST00000618363 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
SHANK2-221ENST00000618363 CUX1P39880 1505 aa20.62■□□□□ 0.89
SHANK2-221ENST00000618363 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
SHANK2-221ENST00000618363 FBLN2P98095 1184 aa20.58■□□□□ 0.89
SHANK2-221ENST00000618363 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
SHANK2-221ENST00000618363 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
SHANK2-221ENST00000618363 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
SHANK2-221ENST00000618363 WRNQ14191 1432 aaPredicted RBP eCLIP20.46■□□□□ 0.87
SHANK2-221ENST00000618363 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
SHANK2-221ENST00000618363 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
SHANK2-221ENST00000618363 CHD1O14646 1710 aa20.44■□□□□ 0.86
SHANK2-221ENST00000618363 SNAPC4Q5SXM2 1469 aa20.43■□□□□ 0.86
SHANK2-221ENST00000618363 GAPVD1Q14C86 1478 aa20.42■□□□□ 0.86
SHANK2-221ENST00000618363 MAGI1Q96QZ7 1491 aaPredicted RBP20.42■□□□□ 0.86
SHANK2-221ENST00000618363 ABCA10Q8WWZ4 1543 aa20.41■□□□□ 0.86
SHANK2-221ENST00000618363 TOP2BQ02880 1626 aa20.39■□□□□ 0.86
SHANK2-221ENST00000618363 BIVM-ERCC5R4GMW8 1640 aa20.37■□□□□ 0.85
SHANK2-221ENST00000618363 RIMBP3CA6NJZ7 1639 aa20.35■□□□□ 0.85
SHANK2-221ENST00000618363 RIMBP3BA6NNM3 1639 aa20.35■□□□□ 0.85
SHANK2-221ENST00000618363 RIMBP3Q9UFD9 1639 aa20.35■□□□□ 0.85
SHANK2-221ENST00000618363 SYNJ1O43426 1573 aa20.34■□□□□ 0.85
SHANK2-221ENST00000618363 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
SHANK2-221ENST00000618363 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
SHANK2-221ENST00000618363 ARHGEF11O15085 1522 aa20.33■□□□□ 0.85
SHANK2-221ENST00000618363 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
SHANK2-221ENST00000618363 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
SHANK2-221ENST00000618363 CLASP1Q7Z460 1538 aa20.19■□□□□ 0.82
SHANK2-221ENST00000618363 FHAD1B1AJZ9 1412 aa20.18■□□□□ 0.82
SHANK2-221ENST00000618363 ERICH3Q5RHP9 1530 aa20.17■□□□□ 0.82
SHANK2-221ENST00000618363 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
SHANK2-221ENST00000618363 ADAMTS12P58397 1594 aa20.16■□□□□ 0.82
SHANK2-221ENST00000618363 ARAP1Q96P48 1450 aa20.12■□□□□ 0.81
SHANK2-221ENST00000618363 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
SHANK2-221ENST00000618363 NUP160Q12769 1436 aa20.06■□□□□ 0.8
SHANK2-221ENST00000618363 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
SHANK2-221ENST00000618363 TRHP20396 242 aaPredicted RBP20.01■□□□□ 0.79
SHANK2-221ENST00000618363 IGF1RP08069 1367 aa19.99■□□□□ 0.79
SHANK2-221ENST00000618363 CUL7Q14999 1698 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms