RNA–Protein interactions for RNA: ENST00000618159.1

PSMB3-210, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-210ENST00000618159 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
PSMB3-210ENST00000618159 ABCC9O60706 1549 aa22.01■■□□□ 1.11
PSMB3-210ENST00000618159 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
PSMB3-210ENST00000618159 DNAJC5BQ9UF47 199 aa21.13■□□□□ 0.97
PSMB3-210ENST00000618159 RB1CC1Q8TDY2 1594 aa20.74■□□□□ 0.91
PSMB3-210ENST00000618159 NACADO15069 1562 aa20.47■□□□□ 0.87
PSMB3-210ENST00000618159 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
PSMB3-210ENST00000618159 PABPN1Q86U42 306 aaKnown RBP eCLIP20.39■□□□□ 0.85
PSMB3-210ENST00000618159 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
PSMB3-210ENST00000618159 DCAF8L2P0C7V8 631 aa20.17■□□□□ 0.82
PSMB3-210ENST00000618159 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
PSMB3-210ENST00000618159 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
PSMB3-210ENST00000618159 CECR2Q9BXF3 1484 aa19.87■□□□□ 0.77
PSMB3-210ENST00000618159 SHROOM4Q9ULL8 1493 aa19.8■□□□□ 0.76
PSMB3-210ENST00000618159 DNAJC5Q9H3Z4 198 aa19.74■□□□□ 0.75
PSMB3-210ENST00000618159 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
PSMB3-210ENST00000618159 SCRIBQ14160 1630 aa19.6■□□□□ 0.73
PSMB3-210ENST00000618159 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
PSMB3-210ENST00000618159 ZCCHC6Q5VYS8 1495 aaKnown RBP19.57■□□□□ 0.72
PSMB3-210ENST00000618159 CUX2O14529 1486 aa19.19■□□□□ 0.66
PSMB3-210ENST00000618159 ERCC6Q03468 1493 aa19.02■□□□□ 0.63
PSMB3-210ENST00000618159 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
PSMB3-210ENST00000618159 NESP48681 1621 aa18.79■□□□□ 0.6
PSMB3-210ENST00000618159 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.6
PSMB3-210ENST00000618159 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
PSMB3-210ENST00000618159 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
PSMB3-210ENST00000618159 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
PSMB3-210ENST00000618159 SMARCA4P51532 1647 aa18.66■□□□□ 0.58
PSMB3-210ENST00000618159 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
PSMB3-210ENST00000618159 KIF21AQ7Z4S6 1674 aa18.6■□□□□ 0.57
PSMB3-210ENST00000618159 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
PSMB3-210ENST00000618159 BAZ1BQ9UIG0 1483 aaKnown RBP18.54■□□□□ 0.56
PSMB3-210ENST00000618159 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
PSMB3-210ENST00000618159 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
PSMB3-210ENST00000618159 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
PSMB3-210ENST00000618159 WDR62O43379 1518 aa18.33■□□□□ 0.53
PSMB3-210ENST00000618159 MRC2Q9UBG0 1479 aa18.33■□□□□ 0.52
PSMB3-210ENST00000618159 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
PSMB3-210ENST00000618159 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
PSMB3-210ENST00000618159 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
PSMB3-210ENST00000618159 CEP164Q9UPV0 1460 aa18.15■□□□□ 0.5
PSMB3-210ENST00000618159 WIZO95785 1651 aa18.09■□□□□ 0.49
PSMB3-210ENST00000618159 RIMBP3CA6NJZ7 1639 aa18.09■□□□□ 0.49
PSMB3-210ENST00000618159 RIMBP3BA6NNM3 1639 aa18.09■□□□□ 0.49
PSMB3-210ENST00000618159 RIMBP3Q9UFD9 1639 aa18.09■□□□□ 0.49
PSMB3-210ENST00000618159 FANCD2Q9BXW9 1451 aa18.09■□□□□ 0.49
PSMB3-210ENST00000618159 URB2Q14146 1524 aaKnown RBP18■□□□□ 0.47
PSMB3-210ENST00000618159 CFTRP13569 1480 aa17.98■□□□□ 0.47
PSMB3-210ENST00000618159 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
PSMB3-210ENST00000618159 PRDM2Q13029 1718 aa17.88■□□□□ 0.45
PSMB3-210ENST00000618159 ZNF608Q9ULD9 1512 aaPredicted RBP17.86■□□□□ 0.45
PSMB3-210ENST00000618159 CYB5RLQ6IPT4 315 aa17.8■□□□□ 0.44
PSMB3-210ENST00000618159 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
PSMB3-210ENST00000618159 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
PSMB3-210ENST00000618159 CHD1O14646 1710 aa17.77■□□□□ 0.44
PSMB3-210ENST00000618159 EIF4G3O43432 1585 aaKnown RBP17.75■□□□□ 0.43
PSMB3-210ENST00000618159 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
PSMB3-210ENST00000618159 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
PSMB3-210ENST00000618159 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
PSMB3-210ENST00000618159 RSF1Q96T23 1441 aaPredicted RBP17.7■□□□□ 0.42
PSMB3-210ENST00000618159 TARBP1Q13395 1621 aaKnown RBP17.62■□□□□ 0.41
PSMB3-210ENST00000618159 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.41
PSMB3-210ENST00000618159 DNMBPQ6XZF7 1577 aa17.6■□□□□ 0.41
PSMB3-210ENST00000618159 ABCC8Q09428 1581 aa17.59■□□□□ 0.41
PSMB3-210ENST00000618159 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
PSMB3-210ENST00000618159 CCDC88BA6NC98 1476 aa17.57■□□□□ 0.4
PSMB3-210ENST00000618159 FBLN2P98095 1184 aa17.54■□□□□ 0.4
PSMB3-210ENST00000618159 CLASP1Q7Z460 1538 aa17.51■□□□□ 0.39
PSMB3-210ENST00000618159 POLA1P09884 1462 aaPredicted RBP17.49■□□□□ 0.39
PSMB3-210ENST00000618159 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
PSMB3-210ENST00000618159 SNAPC4Q5SXM2 1469 aa17.42■□□□□ 0.38
PSMB3-210ENST00000618159 SYNJ1O43426 1573 aa17.41■□□□□ 0.38
PSMB3-210ENST00000618159 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
PSMB3-210ENST00000618159 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
PSMB3-210ENST00000618159 SOGA1O94964 1423 aa17.37■□□□□ 0.37
PSMB3-210ENST00000618159 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
PSMB3-210ENST00000618159 CHMP7Q8WUX9 453 aaPredicted RBP17.32■□□□□ 0.36
PSMB3-210ENST00000618159 GAPVD1Q14C86 1478 aa17.31■□□□□ 0.36
PSMB3-210ENST00000618159 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
PSMB3-210ENST00000618159 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
PSMB3-210ENST00000618159 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
PSMB3-210ENST00000618159 PBRM1Q86U86 1689 aa17.27■□□□□ 0.36
PSMB3-210ENST00000618159 CUX1P39880 1505 aa17.22■□□□□ 0.35
PSMB3-210ENST00000618159 ERCC6L2Q5T890 1561 aa17.21■□□□□ 0.35
PSMB3-210ENST00000618159 KIF13AQ9H1H9 1805 aa17.19■□□□□ 0.34
PSMB3-210ENST00000618159 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
PSMB3-210ENST00000618159 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
PSMB3-210ENST00000618159 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
PSMB3-210ENST00000618159 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
PSMB3-210ENST00000618159 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
PSMB3-210ENST00000618159 NUP160Q12769 1436 aa17.04■□□□□ 0.32
PSMB3-210ENST00000618159 ADAMTS12P58397 1594 aa17.03■□□□□ 0.32
PSMB3-210ENST00000618159 ILDR1Q86SU0 546 aaPredicted RBP16.94■□□□□ 0.3
PSMB3-210ENST00000618159 KDM4FA0A1W2PPD8 638 aa16.93■□□□□ 0.3
PSMB3-210ENST00000618159 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
PSMB3-210ENST00000618159 DIP2BQ9P265 1576 aa16.9■□□□□ 0.3
PSMB3-210ENST00000618159 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
PSMB3-210ENST00000618159 PRG4Q92954 1404 aaPredicted RBP16.89■□□□□ 0.29
PSMB3-210ENST00000618159 FAM69CQ0P6D2 419 aa16.89■□□□□ 0.29
PSMB3-210ENST00000618159 KDM6BO15054 1643 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms