RNA–Protein interactions for RNA: ENST00000618072.4

CDK2AP1-207, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 3 BASIC

Gene CDK2AP1, Length 1,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-207ENST00000618072 NISCHQ9Y2I1 1504 aa43.99■■■■■ 4.63
CDK2AP1-207ENST00000618072 ABCC9O60706 1549 aa41.06■■■■■ 4.16
CDK2AP1-207ENST00000618072 CCDC180Q9P1Z9 1646 aa40.06■■■■■ 4
CDK2AP1-207ENST00000618072 DNAJC5BQ9UF47 199 aa39.42■■■■□ 3.9
CDK2AP1-207ENST00000618072 RB1CC1Q8TDY2 1594 aa38.63■■■■□ 3.77
CDK2AP1-207ENST00000618072 NACADO15069 1562 aa38.08■■■■□ 3.69
CDK2AP1-207ENST00000618072 PABPN1Q86U42 306 aaKnown RBP eCLIP37.97■■■■□ 3.67
CDK2AP1-207ENST00000618072 UNC13AQ9UPW8 1703 aa37.84■■■■□ 3.65
CDK2AP1-207ENST00000618072 DCAF8L2P0C7V8 631 aa37.58■■■■□ 3.61
CDK2AP1-207ENST00000618072 BICRAQ9NZM4 1560 aa37.54■■■■□ 3.6
CDK2AP1-207ENST00000618072 MYO15BQ96JP2 1530 aa37.16■■■■□ 3.54
CDK2AP1-207ENST00000618072 CECR2Q9BXF3 1484 aa37.11■■■■□ 3.53
CDK2AP1-207ENST00000618072 CC2D2AQ9P2K1 1620 aa37.07■■■■□ 3.53
CDK2AP1-207ENST00000618072 DNAJC5Q9H3Z4 198 aa37.05■■■■□ 3.52
CDK2AP1-207ENST00000618072 SHROOM4Q9ULL8 1493 aa36.94■■■■□ 3.5
CDK2AP1-207ENST00000618072 EIF4G1Q04637 1599 aaKnown RBP36.72■■■■□ 3.47
CDK2AP1-207ENST00000618072 SCRIBQ14160 1630 aa36.4■■■■□ 3.42
CDK2AP1-207ENST00000618072 DCAF1Q9Y4B6 1507 aa36.28■■■■□ 3.4
CDK2AP1-207ENST00000618072 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
CDK2AP1-207ENST00000618072 CUX2O14529 1486 aa35.87■■■■□ 3.33
CDK2AP1-207ENST00000618072 ERCC6Q03468 1493 aa35.55■■■■□ 3.28
CDK2AP1-207ENST00000618072 NCAPD3P42695 1498 aa35.11■■■■□ 3.21
CDK2AP1-207ENST00000618072 TRIM41Q8WV44 630 aa34.98■■■■□ 3.19
CDK2AP1-207ENST00000618072 NESP48681 1621 aa34.95■■■■□ 3.18
CDK2AP1-207ENST00000618072 THOC2Q8NI27 1593 aaKnown RBP34.9■■■■□ 3.18
CDK2AP1-207ENST00000618072 ATAD2BQ9ULI0 1458 aa34.86■■■■□ 3.17
CDK2AP1-207ENST00000618072 HMGXB3Q12766 1538 aa34.82■■■■□ 3.16
CDK2AP1-207ENST00000618072 SMARCA2P51531 1590 aa34.74■■■■□ 3.15
CDK2AP1-207ENST00000618072 SMARCA4P51532 1647 aa34.6■■■■□ 3.13
CDK2AP1-207ENST00000618072 LAMC3Q9Y6N6 1575 aa34.57■■■■□ 3.13
CDK2AP1-207ENST00000618072 KIF21AQ7Z4S6 1674 aa34.56■■■■□ 3.12
CDK2AP1-207ENST00000618072 BAZ1BQ9UIG0 1483 aaKnown RBP34.49■■■■□ 3.11
CDK2AP1-207ENST00000618072 PDS5BQ9NTI5 1447 aa34.36■■■■□ 3.09
CDK2AP1-207ENST00000618072 PEG3Q9GZU2 1588 aa34.26■■■■□ 3.07
CDK2AP1-207ENST00000618072 BAZ1AQ9NRL2 1556 aaPredicted RBP34.24■■■■□ 3.07
CDK2AP1-207ENST00000618072 MRC2Q9UBG0 1479 aa34.15■■■■□ 3.06
CDK2AP1-207ENST00000618072 WDR62O43379 1518 aa34.14■■■■□ 3.06
CDK2AP1-207ENST00000618072 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
CDK2AP1-207ENST00000618072 OSCARQ8IYS5 282 aa33.96■■■■□ 3.03
CDK2AP1-207ENST00000618072 MROH2BQ7Z745 1585 aa33.88■■■■□ 3.01
CDK2AP1-207ENST00000618072 CEP164Q9UPV0 1460 aa33.81■■■■□ 3
CDK2AP1-207ENST00000618072 RIMBP3CA6NJZ7 1639 aa33.77■■■■□ 3
CDK2AP1-207ENST00000618072 RIMBP3BA6NNM3 1639 aa33.77■■■■□ 3
CDK2AP1-207ENST00000618072 RIMBP3Q9UFD9 1639 aa33.77■■■■□ 3
CDK2AP1-207ENST00000618072 FANCD2Q9BXW9 1451 aa33.64■■■□□ 2.98
CDK2AP1-207ENST00000618072 ARHGEF11O15085 1522 aa33.52■■■□□ 2.96
CDK2AP1-207ENST00000618072 WIZO95785 1651 aa33.45■■■□□ 2.95
CDK2AP1-207ENST00000618072 URB2Q14146 1524 aaKnown RBP33.44■■■□□ 2.94
CDK2AP1-207ENST00000618072 CFTRP13569 1480 aa33.38■■■□□ 2.93
CDK2AP1-207ENST00000618072 TRHP20396 242 aaPredicted RBP33.26■■■□□ 2.91
CDK2AP1-207ENST00000618072 CYB5RLQ6IPT4 315 aa33.25■■■□□ 2.91
CDK2AP1-207ENST00000618072 ZNF608Q9ULD9 1512 aaPredicted RBP33.2■■■□□ 2.91
CDK2AP1-207ENST00000618072 IFT140Q96RY7 1462 aa33.14■■■□□ 2.9
CDK2AP1-207ENST00000618072 AEBP2Q6ZN18 517 aaPredicted RBP33.14■■■□□ 2.9
CDK2AP1-207ENST00000618072 PRDM2Q13029 1718 aa33.12■■■□□ 2.89
CDK2AP1-207ENST00000618072 ARAP1Q96P48 1450 aa33.1■■■□□ 2.89
CDK2AP1-207ENST00000618072 RSF1Q96T23 1441 aaPredicted RBP33.1■■■□□ 2.89
CDK2AP1-207ENST00000618072 CHD1O14646 1710 aa33.04■■■□□ 2.88
CDK2AP1-207ENST00000618072 EIF4G3O43432 1585 aaKnown RBP33.04■■■□□ 2.88
CDK2AP1-207ENST00000618072 TOP2AP11388 1531 aaKnown RBP32.94■■■□□ 2.86
CDK2AP1-207ENST00000618072 TOPBP1Q92547 1522 aa32.88■■■□□ 2.85
CDK2AP1-207ENST00000618072 ABCC8Q09428 1581 aa32.73■■■□□ 2.83
CDK2AP1-207ENST00000618072 AQRO60306 1485 aaKnown RBP eCLIP32.73■■■□□ 2.83
CDK2AP1-207ENST00000618072 FBLN2P98095 1184 aa32.72■■■□□ 2.83
CDK2AP1-207ENST00000618072 TARBP1Q13395 1621 aaKnown RBP32.71■■■□□ 2.83
CDK2AP1-207ENST00000618072 DNMBPQ6XZF7 1577 aa32.7■■■□□ 2.82
CDK2AP1-207ENST00000618072 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
CDK2AP1-207ENST00000618072 CLASP1Q7Z460 1538 aa32.57■■■□□ 2.8
CDK2AP1-207ENST00000618072 POLA1P09884 1462 aaPredicted RBP32.48■■■□□ 2.79
CDK2AP1-207ENST00000618072 SYNJ1O43426 1573 aa32.45■■■□□ 2.79
CDK2AP1-207ENST00000618072 SNAPC4Q5SXM2 1469 aa32.41■■■□□ 2.78
CDK2AP1-207ENST00000618072 RAD54L2Q9Y4B4 1467 aa32.35■■■□□ 2.77
CDK2AP1-207ENST00000618072 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
CDK2AP1-207ENST00000618072 WDR97A6NE52 1622 aa32.32■■■□□ 2.76
CDK2AP1-207ENST00000618072 CHMP7Q8WUX9 453 aaPredicted RBP32.29■■■□□ 2.76
CDK2AP1-207ENST00000618072 MAGI1Q96QZ7 1491 aaPredicted RBP32.29■■■□□ 2.76
CDK2AP1-207ENST00000618072 GAPVD1Q14C86 1478 aa32.28■■■□□ 2.76
CDK2AP1-207ENST00000618072 SOGA1O94964 1423 aa32.26■■■□□ 2.75
CDK2AP1-207ENST00000618072 SYNJ2O15056 1496 aa32.18■■■□□ 2.74
CDK2AP1-207ENST00000618072 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
CDK2AP1-207ENST00000618072 FGD5Q6ZNL6 1462 aa32.11■■■□□ 2.73
CDK2AP1-207ENST00000618072 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
CDK2AP1-207ENST00000618072 KIF13AQ9H1H9 1805 aa31.98■■■□□ 2.71
CDK2AP1-207ENST00000618072 ERCC6L2Q5T890 1561 aa31.96■■■□□ 2.71
CDK2AP1-207ENST00000618072 CUX1P39880 1505 aa31.91■■■□□ 2.7
CDK2AP1-207ENST00000618072 ILDR1Q86SU0 546 aaPredicted RBP31.83■■■□□ 2.69
CDK2AP1-207ENST00000618072 CEP170Q5SW79 1584 aa31.82■■■□□ 2.68
CDK2AP1-207ENST00000618072 ABCA5Q8WWZ7 1642 aa31.78■■■□□ 2.68
CDK2AP1-207ENST00000618072 GRIN2AQ12879 1464 aa31.75■■■□□ 2.67
CDK2AP1-207ENST00000618072 SHROOM2Q13796 1616 aa31.71■■■□□ 2.67
CDK2AP1-207ENST00000618072 SUPT5HO00267 1087 aaKnown RBP31.69■■■□□ 2.66
CDK2AP1-207ENST00000618072 ABCA10Q8WWZ4 1543 aa31.68■■■□□ 2.66
CDK2AP1-207ENST00000618072 NUP160Q12769 1436 aa31.67■■■□□ 2.66
CDK2AP1-207ENST00000618072 ADAMTS12P58397 1594 aa31.63■■■□□ 2.65
CDK2AP1-207ENST00000618072 KDM4FA0A1W2PPD8 638 aa31.61■■■□□ 2.65
CDK2AP1-207ENST00000618072 ABCC10Q5T3U5 1492 aa31.56■■■□□ 2.64
CDK2AP1-207ENST00000618072 KDM6BO15054 1643 aa31.54■■■□□ 2.64
CDK2AP1-207ENST00000618072 FAM69CQ0P6D2 419 aa31.53■■■□□ 2.64
CDK2AP1-207ENST00000618072 DIP2BQ9P265 1576 aa31.51■■■□□ 2.63
CDK2AP1-207ENST00000618072 MAPKBP1O60336 1514 aa31.47■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms