RNA–Protein interactions for RNA: ENST00000616018.1

AC239809.3-218, humanhuman

TSL 5 BASIC

Gene AC239809.3, Length 1,023 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239809.3-218ENST00000616018 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
AC239809.3-218ENST00000616018 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
AC239809.3-218ENST00000616018 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
AC239809.3-218ENST00000616018 PHF23Q9BUL5 403 aaPredicted RBP20.86■□□□□ 0.93
AC239809.3-218ENST00000616018 NISCHQ9Y2I1 1504 aa20.06■□□□□ 0.8
AC239809.3-218ENST00000616018 FOXD1Q16676 465 aa19.75■□□□□ 0.75
AC239809.3-218ENST00000616018 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
AC239809.3-218ENST00000616018 MSH5O43196 834 aa18.84■□□□□ 0.61
AC239809.3-218ENST00000616018 PLPPR3Q6T4P5 718 aa18.58■□□□□ 0.56
AC239809.3-218ENST00000616018 PIAS4Q8N2W9 510 aaPredicted RBP18.38■□□□□ 0.53
AC239809.3-218ENST00000616018 ABCC9O60706 1549 aa18.33■□□□□ 0.53
AC239809.3-218ENST00000616018 PPP6R1Q9UPN7 881 aa18.32■□□□□ 0.52
AC239809.3-218ENST00000616018 ADRA2BP18089 450 aa18.22■□□□□ 0.51
AC239809.3-218ENST00000616018 CCDC180Q9P1Z9 1646 aa18.03■□□□□ 0.48
AC239809.3-218ENST00000616018 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
AC239809.3-218ENST00000616018 RB1CC1Q8TDY2 1594 aa17.34■□□□□ 0.37
AC239809.3-218ENST00000616018 DCAF8L2P0C7V8 631 aa17.28■□□□□ 0.36
AC239809.3-218ENST00000616018 NACADO15069 1562 aa17.16■□□□□ 0.34
AC239809.3-218ENST00000616018 PABPN1Q86U42 306 aaKnown RBP eCLIP17.11■□□□□ 0.33
AC239809.3-218ENST00000616018 MYO15BQ96JP2 1530 aa16.81■□□□□ 0.28
AC239809.3-218ENST00000616018 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
AC239809.3-218ENST00000616018 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
AC239809.3-218ENST00000616018 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
AC239809.3-218ENST00000616018 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
AC239809.3-218ENST00000616018 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
AC239809.3-218ENST00000616018 ZCCHC6Q5VYS8 1495 aaKnown RBP16.54■□□□□ 0.24
AC239809.3-218ENST00000616018 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
AC239809.3-218ENST00000616018 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
AC239809.3-218ENST00000616018 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
AC239809.3-218ENST00000616018 CC2D2AQ9P2K1 1620 aa16.5■□□□□ 0.23
AC239809.3-218ENST00000616018 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
AC239809.3-218ENST00000616018 SCRIBQ14160 1630 aa16.48■□□□□ 0.23
AC239809.3-218ENST00000616018 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
AC239809.3-218ENST00000616018 PPP4R3CPQ6ZMV5 832 aa16.25■□□□□ 0.19
AC239809.3-218ENST00000616018 DNAJC5Q9H3Z4 198 aa16.15■□□□□ 0.18
AC239809.3-218ENST00000616018 HOXD11P31277 338 aaPredicted RBP16.1■□□□□ 0.17
AC239809.3-218ENST00000616018 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
AC239809.3-218ENST00000616018 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
AC239809.3-218ENST00000616018 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
AC239809.3-218ENST00000616018 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
AC239809.3-218ENST00000616018 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
AC239809.3-218ENST00000616018 CUX2O14529 1486 aa15.86■□□□□ 0.13
AC239809.3-218ENST00000616018 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
AC239809.3-218ENST00000616018 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
AC239809.3-218ENST00000616018 C1QBPQ07021 282 aaKnown RBP15.74■□□□□ 0.11
AC239809.3-218ENST00000616018 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
AC239809.3-218ENST00000616018 HMGXB3Q12766 1538 aa15.67■□□□□ 0.1
AC239809.3-218ENST00000616018 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
AC239809.3-218ENST00000616018 NESP48681 1621 aa15.65■□□□□ 0.1
AC239809.3-218ENST00000616018 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
AC239809.3-218ENST00000616018 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
AC239809.3-218ENST00000616018 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
AC239809.3-218ENST00000616018 PDS5BQ9NTI5 1447 aa15.51■□□□□ 0.07
AC239809.3-218ENST00000616018 LAMC3Q9Y6N6 1575 aa15.51■□□□□ 0.07
AC239809.3-218ENST00000616018 PEG3Q9GZU2 1588 aa15.48■□□□□ 0.07
AC239809.3-218ENST00000616018 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
AC239809.3-218ENST00000616018 TRIM41Q8WV44 630 aa15.45■□□□□ 0.06
AC239809.3-218ENST00000616018 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
AC239809.3-218ENST00000616018 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
AC239809.3-218ENST00000616018 KIF21AQ7Z4S6 1674 aa15.38■□□□□ 0.05
AC239809.3-218ENST00000616018 NPM3O75607 178 aaKnown RBP15.35■□□□□ 0.05
AC239809.3-218ENST00000616018 MRC2Q9UBG0 1479 aa15.33■□□□□ 0.05
AC239809.3-218ENST00000616018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
AC239809.3-218ENST00000616018 CEP164Q9UPV0 1460 aa15.26■□□□□ 0.03
AC239809.3-218ENST00000616018 WIZO95785 1651 aa15.25■□□□□ 0.03
AC239809.3-218ENST00000616018 WDR62O43379 1518 aa15.24■□□□□ 0.03
AC239809.3-218ENST00000616018 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
AC239809.3-218ENST00000616018 FANCD2Q9BXW9 1451 aa15.21■□□□□ 0.03
AC239809.3-218ENST00000616018 CFTRP13569 1480 aa15.14■□□□□ 0.01
AC239809.3-218ENST00000616018 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
AC239809.3-218ENST00000616018 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
AC239809.3-218ENST00000616018 URB2Q14146 1524 aaKnown RBP15.04■□□□□ -0
AC239809.3-218ENST00000616018 POTEHQ6S545 545 aa15.03■□□□□ -0
AC239809.3-218ENST00000616018 U3KPZ7 1027 aaPredicted RBP14.96□□□□□ -0.01
AC239809.3-218ENST00000616018 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
AC239809.3-218ENST00000616018 CCDC88BA6NC98 1476 aa14.91□□□□□ -0.02
AC239809.3-218ENST00000616018 ZNF608Q9ULD9 1512 aaPredicted RBP14.91□□□□□ -0.02
AC239809.3-218ENST00000616018 CYB5RLQ6IPT4 315 aa14.9□□□□□ -0.02
AC239809.3-218ENST00000616018 ABCC8Q09428 1581 aa14.9□□□□□ -0.02
AC239809.3-218ENST00000616018 RIMBP3CA6NJZ7 1639 aa14.89□□□□□ -0.03
AC239809.3-218ENST00000616018 RIMBP3BA6NNM3 1639 aa14.89□□□□□ -0.03
AC239809.3-218ENST00000616018 RIMBP3Q9UFD9 1639 aa14.89□□□□□ -0.03
AC239809.3-218ENST00000616018 FBLN2P98095 1184 aa14.89□□□□□ -0.03
AC239809.3-218ENST00000616018 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
AC239809.3-218ENST00000616018 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
AC239809.3-218ENST00000616018 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
AC239809.3-218ENST00000616018 KCNA4P22459 653 aa14.87□□□□□ -0.03
AC239809.3-218ENST00000616018 ARHGEF11O15085 1522 aa14.85□□□□□ -0.03
AC239809.3-218ENST00000616018 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.04
AC239809.3-218ENST00000616018 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
AC239809.3-218ENST00000616018 DNMBPQ6XZF7 1577 aa14.78□□□□□ -0.04
AC239809.3-218ENST00000616018 SPINK5Q9NQ38 1064 aaPredicted RBP14.78□□□□□ -0.04
AC239809.3-218ENST00000616018 DSG3P32926 999 aa14.76□□□□□ -0.05
AC239809.3-218ENST00000616018 CAPN15O75808 1086 aa14.73□□□□□ -0.05
AC239809.3-218ENST00000616018 SLC4A2P04920 1241 aa14.72□□□□□ -0.05
AC239809.3-218ENST00000616018 CHMP7Q8WUX9 453 aaPredicted RBP14.72□□□□□ -0.05
AC239809.3-218ENST00000616018 SOGA1O94964 1423 aa14.72□□□□□ -0.05
AC239809.3-218ENST00000616018 TDRD9Q8NDG6 1382 aaKnown RBP14.71□□□□□ -0.06
AC239809.3-218ENST00000616018 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
AC239809.3-218ENST00000616018 CHD1O14646 1710 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms