RNA–Protein interactions for RNA: ENST00000614884.1

DDB2-209, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-209ENST00000614884 NISCHQ9Y2I1 1504 aa30.68■■■□□ 2.5
DDB2-209ENST00000614884 ABCC9O60706 1549 aa29.21■■■□□ 2.27
DDB2-209ENST00000614884 DNAJC5BQ9UF47 199 aa28.42■■■□□ 2.14
DDB2-209ENST00000614884 CCDC180Q9P1Z9 1646 aa27.96■■■□□ 2.07
DDB2-209ENST00000614884 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
DDB2-209ENST00000614884 PABPN1Q86U42 306 aaKnown RBP eCLIP27.04■■□□□ 1.92
DDB2-209ENST00000614884 DNAJC5Q9H3Z4 198 aa26.81■■□□□ 1.88
DDB2-209ENST00000614884 NACADO15069 1562 aa26.7■■□□□ 1.86
DDB2-209ENST00000614884 UNC13AQ9UPW8 1703 aa26.62■■□□□ 1.85
DDB2-209ENST00000614884 BICRAQ9NZM4 1560 aa26.5■■□□□ 1.83
DDB2-209ENST00000614884 DCAF8L2P0C7V8 631 aa26.47■■□□□ 1.83
DDB2-209ENST00000614884 CECR2Q9BXF3 1484 aa26.38■■□□□ 1.81
DDB2-209ENST00000614884 CC2D2AQ9P2K1 1620 aa26.27■■□□□ 1.8
DDB2-209ENST00000614884 EIF4G1Q04637 1599 aaKnown RBP25.92■■□□□ 1.74
DDB2-209ENST00000614884 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
DDB2-209ENST00000614884 SHROOM4Q9ULL8 1493 aa25.87■■□□□ 1.73
DDB2-209ENST00000614884 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
DDB2-209ENST00000614884 CUX2O14529 1486 aa25.52■■□□□ 1.68
DDB2-209ENST00000614884 TRIM41Q8WV44 630 aa25.29■■□□□ 1.64
DDB2-209ENST00000614884 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
DDB2-209ENST00000614884 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
DDB2-209ENST00000614884 DCAF1Q9Y4B6 1507 aa25.17■■□□□ 1.62
DDB2-209ENST00000614884 NESP48681 1621 aa24.79■■□□□ 1.56
DDB2-209ENST00000614884 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
DDB2-209ENST00000614884 NCAPD3P42695 1498 aa24.68■■□□□ 1.54
DDB2-209ENST00000614884 SMARCA2P51531 1590 aa24.54■■□□□ 1.52
DDB2-209ENST00000614884 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
DDB2-209ENST00000614884 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
DDB2-209ENST00000614884 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
DDB2-209ENST00000614884 LAMC3Q9Y6N6 1575 aa24.29■■□□□ 1.48
DDB2-209ENST00000614884 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
DDB2-209ENST00000614884 BAZ1BQ9UIG0 1483 aaKnown RBP24.2■■□□□ 1.47
DDB2-209ENST00000614884 PDS5BQ9NTI5 1447 aa24.19■■□□□ 1.46
DDB2-209ENST00000614884 SMARCA4P51532 1647 aa24.19■■□□□ 1.46
DDB2-209ENST00000614884 OSCARQ8IYS5 282 aa24.17■■□□□ 1.46
DDB2-209ENST00000614884 MRC2Q9UBG0 1479 aa24.11■■□□□ 1.45
DDB2-209ENST00000614884 WDR62O43379 1518 aa24.08■■□□□ 1.45
DDB2-209ENST00000614884 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
DDB2-209ENST00000614884 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
DDB2-209ENST00000614884 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
DDB2-209ENST00000614884 AEBP2Q6ZN18 517 aaPredicted RBP23.97■■□□□ 1.43
DDB2-209ENST00000614884 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
DDB2-209ENST00000614884 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
DDB2-209ENST00000614884 TRHP20396 242 aaPredicted RBP23.87■■□□□ 1.41
DDB2-209ENST00000614884 ARHGEF11O15085 1522 aa23.85■■□□□ 1.41
DDB2-209ENST00000614884 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
DDB2-209ENST00000614884 CYB5RLQ6IPT4 315 aa23.76■■□□□ 1.39
DDB2-209ENST00000614884 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
DDB2-209ENST00000614884 FANCD2Q9BXW9 1451 aa23.67■■□□□ 1.38
DDB2-209ENST00000614884 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.36
DDB2-209ENST00000614884 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
DDB2-209ENST00000614884 ZNF608Q9ULD9 1512 aaPredicted RBP23.49■■□□□ 1.35
DDB2-209ENST00000614884 CFTRP13569 1480 aa23.38■■□□□ 1.33
DDB2-209ENST00000614884 WIZO95785 1651 aa23.35■■□□□ 1.33
DDB2-209ENST00000614884 IFT140Q96RY7 1462 aa23.32■■□□□ 1.32
DDB2-209ENST00000614884 CHD1O14646 1710 aa23.32■■□□□ 1.32
DDB2-209ENST00000614884 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
DDB2-209ENST00000614884 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
DDB2-209ENST00000614884 FBLN2P98095 1184 aa23.2■■□□□ 1.3
DDB2-209ENST00000614884 ILDR1Q86SU0 546 aaPredicted RBP23.18■■□□□ 1.3
DDB2-209ENST00000614884 AQRO60306 1485 aaKnown RBP eCLIP23.12■■□□□ 1.296e-6■■■■□ 23.2
DDB2-209ENST00000614884 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
DDB2-209ENST00000614884 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
DDB2-209ENST00000614884 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
DDB2-209ENST00000614884 TARBP1Q13395 1621 aaKnown RBP22.97■■□□□ 1.27
DDB2-209ENST00000614884 TOP2AP11388 1531 aaKnown RBP22.93■■□□□ 1.26
DDB2-209ENST00000614884 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.25
DDB2-209ENST00000614884 GAPVD1Q14C86 1478 aa22.85■■□□□ 1.25
DDB2-209ENST00000614884 SNAPC4Q5SXM2 1469 aa22.85■■□□□ 1.25
DDB2-209ENST00000614884 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
DDB2-209ENST00000614884 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
DDB2-209ENST00000614884 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
DDB2-209ENST00000614884 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
DDB2-209ENST00000614884 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
DDB2-209ENST00000614884 CHMP7Q8WUX9 453 aaPredicted RBP22.78■■□□□ 1.24
DDB2-209ENST00000614884 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
DDB2-209ENST00000614884 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
DDB2-209ENST00000614884 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
DDB2-209ENST00000614884 ERCC6L2Q5T890 1561 aa22.65■■□□□ 1.22
DDB2-209ENST00000614884 SOGA1O94964 1423 aa22.65■■□□□ 1.22
DDB2-209ENST00000614884 KIF13AQ9H1H9 1805 aa22.63■■□□□ 1.21
DDB2-209ENST00000614884 SYNJ2O15056 1496 aa22.62■■□□□ 1.21
DDB2-209ENST00000614884 GRIN2BQ13224 1484 aa22.57■■□□□ 1.2
DDB2-209ENST00000614884 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
DDB2-209ENST00000614884 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
DDB2-209ENST00000614884 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
DDB2-209ENST00000614884 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
DDB2-209ENST00000614884 FAM69CQ0P6D2 419 aa22.41■■□□□ 1.18
DDB2-209ENST00000614884 KDM6BO15054 1643 aa22.39■■□□□ 1.17
DDB2-209ENST00000614884 ABCC10Q5T3U5 1492 aa22.34■■□□□ 1.17
DDB2-209ENST00000614884 HECW2Q9P2P5 1572 aa22.32■■□□□ 1.16
DDB2-209ENST00000614884 CUX1P39880 1505 aa22.31■■□□□ 1.16
DDB2-209ENST00000614884 GRIN2AQ12879 1464 aa22.3■■□□□ 1.16
DDB2-209ENST00000614884 DIP2BQ9P265 1576 aa22.29■■□□□ 1.16
DDB2-209ENST00000614884 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
DDB2-209ENST00000614884 NUP160Q12769 1436 aa22.25■■□□□ 1.15
DDB2-209ENST00000614884 ADGRL1O94910 1474 aa22.25■■□□□ 1.15
DDB2-209ENST00000614884 ABCA5Q8WWZ7 1642 aa22.23■■□□□ 1.15
DDB2-209ENST00000614884 TSPOAP1O95153 1857 aa22.21■■□□□ 1.15
DDB2-209ENST00000614884 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms